| Link type | Probability | Chain A piercings | Chain B piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
| view details |
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Unlink | 70% | +6B -171B -199B +280B | |||||||||
Chain A Sequence |
MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSITEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMFGQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ |
Chain A Sequence |
MFIQEPKKLIDTGEIGNASTGDILFDGGNKINSDFNAIYNAFGDQRKMAVANGTGADGQIIHATGYYQKHSITEYATPVKVGTRHDIDTSTVGVKVIIERGELGDCVEFINSNGSISVTNPLTIQAIDSIKGVSGNLVVTSPYSKVTLRCISSDNSTSVWNYSIESMFGQKESPAEGTWNISTSGSVDIPLFHRTEYNMAKLLVTCQSVDGRKIKTAEINILVDTVNSEVISSEYAVMRVGNETEEDEIANIAFSIKENYVTATISSSTVGMRAAVKVIATQKIGVAQ |
| sequence length | 288,288 |
| structure length | 288,288 |
| publication title |
The structure of bacteriophage T4 gene product 9: the trigger for tail contraction.
pubmed doi rcsb |
| molecule tags | Viral protein |
| molecule keywords | PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9)) |
| source organism | Enterobacteria phage t4 |
| pdb deposition date | 1999-03-30 |
| LinkProt deposition date | 2016-10-29 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| AB | PF07880 | T4_gp9_10 | Bacteriophage T4 gp9/10-like protein |
| AB | PF07880 | T4_gp9_10 | Bacteriophage T4 gp9/10-like protein |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Bacteriophage t4 gene product 9 (gp9) | ||
| Mainly Beta | Sandwich | Immunoglobulin-like | 4-oxalocrotonate tautomerase-like | ||
| Mainly Beta | Sandwich | Jelly Rolls | gp9 | ||
| Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Bacteriophage t4 gene product 9 (gp9) | ||
| Mainly Beta | Sandwich | Immunoglobulin-like | 4-oxalocrotonate tautomerase-like | ||
| Mainly Beta | Sandwich | Jelly Rolls | gp9 |
#chains in the LinkProt database with same CATH superfamily 1QEX AB; #chains in the LinkProt database with same CATH topology 3HPJ BDE; 3DKW EIJ; 1AGB AC; 2GSY JOP; 2GSY GHIK; 3H4F ABC; 3E2H ABQ; 1ZLW HLM; 3KDP ABC; 1MV8 AC; 2GSY INS; 2GSY GHN; 1OP3 HKL; 2GSY JKQS; 1SLV AB; 3DXA KM; 3H9H BDF; 3DXA DE; 3DX7 AC; 3JWN HLM; 2GSY EJKP; 3DXA ACD; 3FON ACP; 2GSY CEKO; 2GSY FHIL; 3GSU AP; 1F2N AB; 2GSY CDLO; 2GSY CEOQ; 3FFC ACG; 3H9H ACE; 2GSY DJKO; 3IXA AB; 1AQ5 AC; 3DXA EIJ; 2GSY FP; 1OW6 ABDF; 3DXA FG; 3H9S CD; 3FB6 AB; 1A9B AC; 2GSY FGLN; 1OW6 CF; 3DKW CEH; 1ZLV KM; 2GSY FJKQ; 3DKW CHI; 3DKW GHJ; 3GJF DF; 3GJE AHL; 3DKW FGH; 3DXA ABC; 2GSY EJPQ; 3HAE JKM; 2GSY CHLN; 3E3Q de; 3H7B ACE; 1ZLU HKM; 1MV8 CD; 3H4H BC; 3HAE ABC; 1ZLW KLM; 2GSY GLN; 3E3Q ADQ; 3HAE DFG; 3E3Q BFG; 3JTT DG; 3JWN CGK; 3DSF HL; 1ZLU HM; 3FQR AC; 3G5Y AB; 1A1O AC; 2GSY FGIL; 3FJT AB; 3GSN HP; 3E3Q EW; 3FCS BC; 3FMG HL; 2GSY GIS; 3B9I AB; 2GSY GHR; 3E3Q HIK; 3FFC FH; 1AGE AC; 3JWN FIK; 3HAE HL; 3DKW EFI; 1A9B BDF; 3DKW AGH; 3JWN CEL; 1AHW DE; 3DKW EHI; 2GSY KOQ; 1UT1 DE; 3EOT HL; 3GSU AB; 2GSY FNST; 3GSO AP; 3HNS HL; 3GJF HL; 3FQT AB; 3JTT AB; 3HAE DE; 3DKW DIJ; 3DKW FH; 1ZLU KM; 3E3Q PRT; 3DKW EH; 3HAE ACL; 2GSY IMST; 2GSY FGIK; 3DKW ABC; 3DKW CH; 1MV8 BCD; 3H9S ACE; 3DKW AB; 1A64 AB; 3DKW ABG; 3DXA IKM; 3FRU CD; 1AFV HL; 3IXA CDF; 1A1N ABC; 3EFF AN; 1MV8 BD; 2GSY GLR; 3HAE GI; 1OP5 HLM; 3JTT DEI; 3JTT AEI; 2GSY EFHI; 2GSY DJOP; 1MUU AB; 1ZLU KLM; 1Q8M BC; 2GSY KQST; 3FQN AC; 2GSY KOST; 3HAE ACG; 1AV1 ABCD; 2GSY GHMR; 3E3Q CF; 2GSY ACEO; 1AGD AC; 3DX8 AB; 3HCV ABC; 2GSY HLR; 2GSY GHL; 2GSY KOP; 3HNV HL; 3JWN IKN; 3H4F BC; 1OP3 HM; 3JTT DGH; 3DKW CGH; 3DKW CDH; 3JWN FGN; 1AGB ABC; 3DXA ACJ; 3H9H ADF; 3JTT DFH; 3FT3 ABP; 3HPJ DE; 3HAE NO; 3FFC ABC; 2GSY CJOP; 3FON CD; 1UT1 CF; 2GSY FGIS; 1OP5 LM; 3GIV AC; 3EFF BM; 3EFF MN; 2GSY FKST; 3DKW EF; 3H9H DF; 1A9E AB; 1AHW AF; 2GSY CHLO; 3HPJ AB; 3GEF ACD; 1OP3 KM; 1ZLW HL; 2GSY MRST; 1OM3 HL; 1A5F HL; 3HAE HO; 3HPJ ADF; 3IVK AL; 2GSY HIS; 1ZLW LM; 3IXA ABD; 2GSY GIP; 1CDC AB; 3EFF KN; 2VSC CD; 2GSY EKOP; 3JTT ACI; 3K5S AB; 3EFD KL; 1A9B ABC; 2GSY HKLN; 3FQU AB; 3HAE DFI; 2GSY CGHL; 3FQX AB; 2GSY FJP; 1Q8M AB; 1OW6 BCD; 3GEF AB; 3H4H AB; 3H7B AB; 3FT3 AP; 3DXA FHI; 2GSY ABQ; 3DXA AC; 1A9B DEF; 3JTT ADG; 3DKW BDH; 3HAE LN; 3HLA AB; 3GIV ADE; 1A1M AC; 3E3Q eF; 1UT1 AD; 3KDP CDG; 1NQB AC; 2GSY FNS; 1AFV KM; 3DKW ABH; 3DKW CDF; 2GSY HIL; 3H7B DE; 3H7B ABD; 1ZLV LM; 2GSY EKP; 3FQW AC; 3DKW EGH; 3HAE GT; 3IVK BH; 3FON AB; 3E3Q HJK; 2GSY EOQ; 3E3Q UWX; 2VSC ACD; 3DX9 ACD; 3HAE ACP; 3GSW AB; 3JWN CFN; 3H9S AC; 3HG1 AB; 1MUU BCD; 3DXA KLM; 1GME CD; 3FOM AB; 2GSY ABD; 2GSY HIN; 3KDP ABD; 3JWN HIL; 2W5P AB; 3FT4 AP; 2GSY GHI; 1ZLV HL; 2VSC AC; 1UT1 ADE; 1OP5 HKM; 2GSY EKOS; 2GSY GI; 3JTT CDI; 1MFZ AB; 3FB5 AB; 3GIV ADF; 3GEF BCD; 2GSY FLNP; 3JWN EHN; 2GSY CKOS; 1ZXK AB; 3HAE PQ; 3GSV AP; 3DX9 AB; 3GSN AHP; 1OM3 HLM; 2GSY EHIP; 3GJE AH; 1AGC AB; 3GIV DF; 3JTT AEG; 3FFC ACE; 2GSY FLNS; 3HAE AB; 3JWN IKL; 3FB7 AB; 3DX6 AB; 2GSY GIST; 2GSY FJKP; 2GSY KNOS; 3DKW CDJ; 3FRU ABD; 2GSY LN; 1ZLW HKLM; 3JTT DE; 3DXA ACH; 3DKW BI; 2GSY KPQ; 3H4F AC; 2GSY HLMR; 3DXA IJ; 2GSY FJKO; 1AGD ABC; 3GSX AP; 3IGA AB; 3IXA ACD; 3E3Q cef; 3E3Q aZ; 3JTT GH; 3EFD HL; 3DX7 ABC; 2GSY EIKP; 1ZLV HKM; 3E3Q RS; 1OW6 BC; 3DXA KMO; 1OP3 LM; 3H9H ABC; 2GSY CHLM; 3GIZ HL; 1OP5 HL; 1MUU ABD; 3GSN AB; 2GSY GMRT; 3DKW CD; 3JWN HMN; 3FRU ABC; 3JTT CDG; 3HAE GJK; 1A8J HL; 3FFC CFH; 3EFF KL; 1AV1 ACD; 3HAE IK; 2GSY GIPS; 3E3Q UVX; 3JTT EFH; 3JTT DEG; 3HPJ ACE; 3GSV AB; 3FFC DE; 1OW6 BCF; 2GSY DJQ; 3DXA JKM; 1A1N AB; 3H9H DEF; 3GB7 AB; 3FT3 AB; 3JTT ADE; 3GIV ABD; 3IXA DF; 3FCS AB; 3H7B ADF; 3H9H AC; 1Q8M ABD; 2VSC BCD; 1MUU ABC; 3HAE JMN; 3E3Q MN; 2GSY FHNS; 3JTT BDE; 3DKW ABJ; 3GSQ AB; 2GSY DJOQ; 3JTT AGI; 1OP3 KLM; 3JWN EHK; 2GSY ABOQ; 3EFF AM; 3FQR ABC; 3JWN CEH; 2GSY AEFK; 3E3Q DHK; 2GSY CLOP; 2GSY EKPQ; 1MV8 ABD; 3DX8 ABC; 3HCV AB; 1A1M ABC; 3DKW EFG; 2GSY GHIP; 2GSY FKNQ; 3JWN CFL; 3E3Q AEQ; 1ZLW HKM; 2GSY FGIN; 3GIV DEF; 3GJF DEH; 3HAE ACH; 1OM3 HKM; 2GSY AIPQ; 1AGB AB; 3FQW ABC; 2GSY CDGL; 2GSY GN; 3E2H ACQ; 3HG1 ACE; 3FFC AB; 3GJE BHL; 3FFC FG; 1WWA XY; 3JTT EG; 3HAE PRT; 3JWN GHM; 3H9S ABC; 2GSY KNST; 3FCS AD; 3JWN HLN; 1F2N BC; 3FON CDE; 3GIV AD; 2GSY CJKQ; 1A9E ABC; 3HPJ ABC; 3GJF DFK; 3GSQ ABP; 3IXA DEF; 2GSY CEOP; 3DXA CKM; 3FFC ACD; 2GSY FIP; 3DKW BGH; 3GSN HLP; 1OW6 BD; 1ZLS HL; 3JWN HN; 3DKW BEF; 3DXA AKM; 3GJF EH; 3GEF CD; 3DKW AEH; 3FFC FHI; 3FQX ABC; 3HG1 DE; 3DXA DEJ; 3FCS BCD; 2GSY KPS; 3FQN ABC; 3GEF ABC; 3H4H ABC; 3GJF DE; 1A9B ADF; 3HAE DEF; 3GJF ACL; 3H9H AD; 3IXA ADE; 3DXA FGH; 2GSY IJNP; 1AIF AB; 3GJF DEF; 3HAE ST; 3JWN CGH; 3GIV ACD; 3GJF AB; 1ZLU HL; 3EYU HL; 2GSY MNRT; 1MUU BD; 3FFC BFH; 2GSY KNOP; 1MV8 ABCD; 3DX7 AB; 2GSY GR; 3HAE PQR; 2GSY FNP; 3DKW CDE; 3IVK AH; 3HG1 ABC; 2GSY EFQS; 1AGF AC; 3JWN CEM; 3DKW EHJ; 2GSY GIPQ; 3HAE DFM; 1A9B ACF; 3FQT AC; 3FCS CD; 3HAE DF; 3DKW CEI; 3EFF CK; 1MFZ CD; 2GSY CILN; 3IVK ABL; 3GSN HL; 3FT2 ABP; 2GSY GIK; 3DKW BEH; 2GSY CHLR; 3KDP ACD; 3IVK HL; 3HAE HLO; 3FOL AB; 1OP5 KLM; 3HFM HL; 3JTT BDG; 3DKW ABD; 1OM3 KL; 1OW6 ABD; 3JWN GH; 3JTT CGH; 3DKW EFH; 1MUU ACD; 3GSW ABP; 3GEF BD; 1UT1 BF; 2GSY CKOQ; 2GSY GHIL; 1AGC ABC; 1ZVN AB; 2GSY AJOQ; 3FCS ABD; 1AQK HL; 1OM3 KLM; 1Q8M AD; 1MUU AC; 2GSY GHIR; 3JTT AC; 3DXA NO; 2GSY FHIR; 3DX6 ABC; 3EFF CD; 2GSY CDLN; 1OW6 AB; 3F7V AB; 1ZLV HLM; 3FT2 AP; 2GSY FHIK; 3DKW ACD; 3HAE JK; 1ZLU HLM; 3JWN GN; 1MV8 AB; 3HAE AJM; 1AGD AB; 2GSY INR; 2GSY GHM; 3FRU ACD; 3DXA KL; 3JTT AFH; 3FFC FGH; 1AQ5 BC; 3GEF ABD; 3DKW CDI; 3JWN IK; 1ZLU LM; 3DKW BC; 3GSR AP; 3H7B DEF; 3H9H ADE; 3JTT DFG; 2GSY FIK; 3DKW GHI; 3HPJ DF; 3GJE BL; 1F2N AC; 3JTT ABC; 2VSC ABC; 1OP5 HM; 3HPJ DEF; 3FFC ACF; 3DKW AEF; 3H9H ACD; 2GSY GHMT; 3DXA ACK; 3IXA AC; 2GSY CJKO; 1AQ5 AB; 3GJE AL; 3HNT HL; 2QDN AB; 3H9H DE; 2GSY FGIR; 1OP3 HKLM; 3DKW GH; 1A9E AC; 3GK8 HL; 3GEF AD; 3F7Y AB; 3DKW HIJ; 1OP3 HKM; 1OP3 HLM; 1ZLW HK; 3GSO AB; 3GSV ABP; 2GSY EIKO; 3HAE ACJ; 2VSC BC; 3IXA ABE; 3DXA ACL; 3GJE ABH; 1AV1 CD; 3H9H AB; 3FQX AC; 2GSY HIP; 1Q8M CD; 3H7B ACD; 3JTT ACH; 1AIF AHL; 1AGF ABC; 1AV1 ABC; 3DKW DEF; 1AIF AL; 3FON CE; 2GSY CKOP; 3H7B AC; 3FT4 ABP; 3FQR AB; 3EFF LMN; 3HAE DFN; 1A1O AB; 1A9B CDF; 3GIV ABC; 3HAE LO; 3EYS HL; 3GSX ABP; 1Q8M ABC; 3IXA BDF; 2GSY FNR; 3DKW ABI; 3DKW CDG; 1AGE AB; 2GSY HIM; 3GSR AB; 3JTT BFH; 3DKW CEF; 1UT1 BC; 3E3Q BCG; 3JWN CEK; 3FQW AB; 2GSY KPST; 3FT4 AB; 1Q8M ABCD; 3JTT CEG; 3H9S ACD; 3FFC DFH; 3ES4 AB; 1A9B ACD; 2GSY EFST; 3H9S AB; 3DKW CE; 2GSY GIN; 3FFC ACJ; 3GSO ABP; 3FRU AB; 1ZLW HM; 2GSY ABE; 3DKW CI; 2VSC ABCD; 3KDP ABG; 2GSY FGIP; 3JWN HIK; 3GSU ABP; 3DKW ABF; 1ZLV HM; 1OW6 ABF; 3DKW IJ; 1OP3 HK; 3GSN BHP; 3DKW CFI; 2GSY FI; 2GSY GHIN; 3GSX AB; 2GSY EFHN; 3FOM ABP; 2GSY FHIP; 3HPL AB; 3HAE PR; 3DKW BIJ; 1OW6 AD; 3FQN AB; 2GSY HIK; 1OW6 BF; 1A9B DE; 2GSY GIL; 2P1J AB; 2GSY HLM; 2GSY DFJP; 3HAE JM; 1AGC AC; 3HAE DFL; 3JTT AEF; 3DX8 AC; 2GSY FKPS; 2GSY INP; 3HPJ AD; 2GSY INRS; 3DKW ACI; 3JWN IKM; 3HC3 HL; 3JWN GHI; 2GSY DEJO; 1OP3 HL; 2GSY FJNP; 2GSY KOQS; 3GJF ABC; 2GSY AEFO; 3JTT DF; 3JTT DFI; 3H4F AB; 3JWN MN; 3DXA FH; 3KDP AB; 3DKW CIJ; 3E3Q cdf; 1ZLU HK; 3JWN LMN; 1ZLU HKL; 3EFD HK; 3GJF KM; 1AV1 BCD; 3EFF BN; 3GJE AB; 3DKW EG; 3KDP CD; 2GSY FHNP; 3HPJ AC; 1Q8M BCD; 3GSQ AP; 3FON AP; 3DXA FHJ; 2GSY GKLN; 1F2N ABC; 1OM3 HM; 3DKW DI; 1ZLW KM; 3HPJ ADE; 1MUU CD; 2GSY HIR; 3DKW DGH; 3IXA ABC; 2GSY CIOP; 3GJF ACH; 3HAE LNO; 2W5P ABC; 3H7B ACF; 1MV8 ACD; 2GSY EOP; 3FQU AC; 3HPJ ACD; 3FRU BCD; 3FCS ACD; 3JWN CGL; 3DX9 CD; 3H4H AC; 2W5P BC; 2GSY GHMN; 3HAE DFP; 3IXA ADF; 3DXA AB; 3JTT ADF; 3EO6 AB; 3DKW BDI; 1Q8M ACD; 2GSY FKPQ; 1A1M AB; 1UT1 AE; 2GSY DJP; 1AIF HL; 3JWN EFH; 3EFF KMN; 2GSY EKPS; 3FCT AB; 3JTT AGH; 3JWN GIK; 3H7B DF; 3DKW BD; 3GEF BC; 3EFF AB; 2GSY EKQ; 3DKW FIJ; 1OM3 HKLM; 3IXA DE; 1MV8 ABC; 3HCV AC; 2GSY FKOQ; 2GSY HLMT; 3DKW BCD; 2GSY FKNP; 1OW6 ABCD; 3GEF AC; 3IVK ABH; 1ZLW HKL; 3HG1 AC; 3EFF DL; 1OM3 HKL; 1A9B AB; 1OP5 HKLM; 1OP5 KM; 2GSY MR; 2GSY HLMN; 3E3Q PST; 3JWN HIM; 3HG1 ACD; 3FFC AC; 1GME AB; 3FQT ABC; 1ZLV HK; 2VSC AB; 3JTT AFG; 3HAE PRS; 3FCS ABC; 3FOL AP; 3DKW AIJ; 1OP5 HKL; 3EFF AK; 2GSY EKOQ; 1AQ5 ABC; 3FT2 AB; 2GSY FIKS; 3DXA ACF; 3KDP BCH; 1ZLU HKLM; 3FRU EF; 2GSY HLN; 1A9B DF; 3JWN CE; 2GSY FHIN; 2GSY GIR; 1MUU ABCD; 3GSW AP; 3IXA AD; 3IVK BL; 3JWN FHL; 3FB8 AB; 3GIV DE; 2GSY FHIM; 1AHW AB; 2GSY FLNR; 3HAE AC; 3FOM AP; 3H9S DE; 3KDP CDH; 3DX6 AC; 3DXA DEI; 2GSY FHIS; 2GSY GLMR; 2GSY EFLN; 2GSY CJOQ; 2GSY KNOR; 3FOL ABP; 2GSY DEJQ; 2GSY DEJP; 2VSC BD; 1A1O ABC; 1ZLV HKLM; 2GSY AKQ; 3GIV AB; 3DKW EFJ; 3FFC IJ; 3GJF DFM; 3GJE BH; 3JTT AD; 3FON ACE; 3JTT GI; 3JWN CGI; 1AGE ABC; 3GJF AC; 2GSY EIKQ; 1ZLV HKL; 3GSR ABP; 1QEX AB; 2GSY ABPQ; 3HAE JMO; 1OW6 BCDF; 3FRU AD; 1OM3 HK; 1UT1 BCF; 3HAE DFK; 2GSY ST; 3JTT CDF; 1AGF AB; 3GJE ABL; 2GSY FS; 3JWN CEN; 1ZLV KLM; 2GSY KOS; 1OW6 BDF; 3JTT DEF; 1OP5 HK; 3FON ABP; 2GSY IKQS; 3JWN CGN; 1OW6 ABC; 3EFF CL; 3GJE HL; 1A1N AC; 3EFF DK; 3FFC ACI; 3E3Q IJ; 3E3Q VW; 2VSC ABD; 2W5P AC; 3FCS AC; 3DKW CJ; 3KDP ABH; 2GSY GH; 1AV1 AC; 3FQU ABC; 2GSY FHNR; 3JTT BDF; 3DKW ABE; 1OM3 KM; 3IVK AB; 3DXA DKM; 3DXA EFH; 3H7B ABC; 1OW6 ABCF; 3DXA DJ; 3JWN CEG; 2GSY GHIM; 3KDP BCG; 3E3Q DE; 3DKW HI; 2GSY GHIS; 3DXA EJ; 3DKW DEH; 3JWN GMN; 3JWN CFM; 1AV1 BC; #chains in the LinkProt database with same CATH homology 1QEX AB;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
