| Link type | Probability | Chain M piercings | Chain N piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Unlink | 83% | +104M -161M | |||||||||
| view details |
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Unlink | 83% | +104M -161M | |||||||||
| view details |
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Unlink | 83% | +104M -161M | |||||||||
| view details |
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Unlink | 83% | +104M -161M | |||||||||
| view details |
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Unlink | 83% | +104M -161M | |||||||||
| view details |
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Unlink | 83% | +104M -161M | |||||||||
Chain M Sequence |
SALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLDDNRR |
Chain M Sequence |
SALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLDDNRR |
| sequence length | 139,139 |
| structure length | 139,139 |
| publication title |
Crystal structure of full-length KcsA in its closed conformation.
pubmed doi rcsb |
| molecule tags | Membrane protein |
| molecule keywords | FAB |
| pdb deposition date | 2008-09-08 |
| LinkProt deposition date | 2016-08-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| MN | PF07885 | Ion_trans_2 | Ion channel |
| MN | PF07885 | Ion_trans_2 | Ion channel |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix Hairpins | ||
| Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | ||
| Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix Hairpins | ||
| Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | Single alpha-helices involved in coiled-coils or other helix-helix interfaces |
#chains in the LinkProt database with same CATH superfamily 3EFF KN; 3EFF AM; 3EFF LMN; 3EFF AK; 3EFF DL; 3EFF MN; 3EFF CK; 3EFF BN; 3EFF CL; 3EFF KMN; 3EFF DK; 3EFF BM; 3EFF KL; 3EFF AN; #chains in the LinkProt database with same CATH topology 3ETD CEF; 3ETG BDE; 1MV8 AC; 1MUU BD; 1MV8 ABCD; 3ETD CD; 1MV8 ABC; 1AV1 BCD; 1MUU BCD; 3EFF BN; 3ETD BDE; 3ETG CF; 1G6U AB; 3EFF CK; 1MFZ CD; 3ETG ADF; 1MUU CD; 3ETD AD; 3ETG ADE; 1AQ5 AC; 1MFZ AB; 3ETD CDF; 1OW6 ABDF; 1OW6 BD; 1MV8 ACD; 3ETD ADE; 1OW6 CF; 1OW6 ABD; 1MUU ACD; 3ETD AC; 3ETD CDE; 3ETG AEF; 1MV8 CD; 3ETD BEF; 1MUU AC; 3ETD ADF; 3EFF KMN; 1OW6 AB; 3ETG ACF; 1MV8 AB; 3ETG ABF; 1OW6 ABCD; 1AQ5 BC; 3EFF DL; 1OW6 BC; 3ETG AD; 1MUU ABD; 3ETG BCF; 3EFF MN; 3ETD ABF; 3ETD DE; 1AQ5 AB; 3EFF KL; 1AV1 ACD; 3ETG BF; 1MV8 BCD; 3ETG CEF; 1OW6 BCF; 3ETG BCE; 1MUU ABC; 1MUU ABCD; 3EFF AN; 1MV8 BD; 3ETD BE; 3ETG CDF; 1AV1 CD; 3ETG BE; 1MUU AB; 1AV1 ABC; 3ETD ACE; 3ETD BCE; 3ETG ABE; 3EFF AM; 3EFF LMN; 1AV1 ABCD; 1MV8 ABD; 1QEX AB; 3ETD ACF; 3ETG ABD; 1OW6 BCDF; 3ETD AF; 3EFF BM; 1OW6 BDF; 3EFF AK; 1OW6 ABF; 1OW6 ABC; 3ETG BCD; 3EFF CL; 3ETD ABD; 3EFF DK; 3ETD BF; 3EFF KN; 1AQ5 ABC; 1AV1 AC; 3ETG DE; 3ETD ACD; 3ETD BCF; 1OW6 AD; 1OW6 BCD; 3ETG ACD; 1OW6 BF; 2P1J AB; 3ETD ABE; 1OW6 ABCF; 1AV1 BC; #chains in the LinkProt database with same CATH homology 3ETD CEF; 3EFF KN; 3ETG BF; 1MV8 BCD; 3ETG BDE; 3ETG AEF; 3ETG CEF; 3ETD AF; 3ETD BEF; 1MUU AC; 3EFF KMN; 3ETG BCE; 3ETD ACF; 1MUU ABC; 1AQ5 AC; 1MUU BD; 3EFF AN; 1MV8 BD; 3ETG ACF; 3ETD BE; 3EFF DK; 3ETG CDF; 1MV8 ABCD; 3ETD CD; 3EFF BN; 3ETG BE; 1MV8 AB; 1MUU AB; 1MUU BCD; 3ETG BCD; 3ETD ACE; 3EFF CL; 1MUU ACD; 3ETG ABF; 3ETD ABD; 3ETG ADF; 3EFF BM; 3ETG AD; 1MV8 AC; 3ETD BF; 3ETD CDE; 1AQ5 AB; 1AQ5 BC; 3ETD BDE; 3EFF LMN; 3ETG CF; 3EFF DL; 1MV8 CD; 3ETG DE; 3ETD ACD; 3EFF CK; 1MFZ CD; 3ETD BCE; 1MUU CD; 3EFF AM; 3ETD AD; 3ETD BCF; 1MV8 ABC; 3ETG ACD; 1MV8 ABD; 1MFZ AB; 3ETD CDF; 3ETG ABE; 2P1J AB; 1MUU ABD; 1MV8 ACD; 3ETG BCF; 3EFF MN; 3ETD AC; 3ETD ABF; 3ETD DE; 3ETD ADF; 1AQ5 ABC; 1MUU ABCD; 3ETD ABE; 3EFF KL; 3EFF AK; 3ETG ABD; 3ETD ADE; 3ETG ADE;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
