3FP7EJ

Anionic trypsin variant s195a in complex with bovine pancreatic trypsin inhibitor (bpti) cleaved at the scissile bond (lys15-ala16) determined to the 1.46 a resolution limit
E: 34-37,64-66,125-127,130-132,204-209,217-219
Link type Probability Chain E piercings Chain J piercings
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
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Unlink Unlink 56% -37E +82E
Interpreting sequences
Chain E Sequence
IVGGYTCQENSVPYQVSLN--SGYHFCGGSLINDQWVVSAAHCYKSRIQ-VRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPS-SCAP-AGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDAGGPVVCN----GELQGIVSW-GYGCALPDNPGVYTKVCNYVDWIQDTIAAN
Chain E Sequence
ARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA
sequence length 223,43
structure length 223,43
publication title Structure of a serine protease poised to resynthesize a peptide bond.
pubmed doi rcsb
molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Anionic trypsin-2
source organism Rattus norvegicus
missing residues E: 34-37,64-66,125-127,130-132,204-209,217-219
ec nomenclature ec 3.4.21.4: Trypsin.
pdb deposition date2009-01-04
LinkProt deposition date2016-08-19

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
EJ PF00089 TrypsinTrypsin
EJ PF00014 Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases 3fp7E01
2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteases 3fp7E02
1SLVAB 1AQ7AB 3FP7EJ 1AKSAB 3FP7EI 3FP7EIJ
chains in the LinkProt database with same CATH superfamily
1SLVAB 1AQ7AB 3FP7EJ 1AKSAB 3FP7EI 3FP7EIJ
chains in the LinkProt database with same CATH topology
1SLVAB 1AQ7AB 3FP7EJ 1AKSAB 3FP7EI 3FP7EIJ
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 1SLV AB;  1AQ7 AB;  3FP7 EJ;  1AKS AB;  3FP7 EI;  3FP7 EIJ; 
#chains in the LinkProt database with same CATH topology
 1SLV AB;  1AQ7 AB;  3FP7 EJ;  1AKS AB;  3FP7 EI;  3FP7 EIJ; 
#chains in the LinkProt database with same CATH homology
 1SLV AB;  1AQ7 AB;  3FP7 EJ;  1AKS AB;  3FP7 EI;  3FP7 EIJ; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling