| Link type | Probability | Chain E piercings | Chain J piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
| view details |
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Unlink | 56% | -37E +82E | |||||||||
Chain E Sequence |
IVGGYTCQENSVPYQVSLN--SGYHFCGGSLINDQWVVSAAHCYKSRIQ-VRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPS-SCAP-AGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDAGGPVVCN----GELQGIVSW-GYGCALPDNPGVYTKVCNYVDWIQDTIAAN |
Chain E Sequence |
ARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGA |
| sequence length | 223,43 |
| structure length | 223,43 |
| publication title |
Structure of a serine protease poised to resynthesize a peptide bond.
pubmed doi rcsb |
| molecule tags | Hydrolase/hydrolase inhibitor |
| molecule keywords | Anionic trypsin-2 |
| source organism | Rattus norvegicus |
| missing residues | E: 34-37,64-66,125-127,130-132,204-209,217-219 |
| ec nomenclature |
ec 3.4.21.4: Trypsin. |
| pdb deposition date | 2009-01-04 |
| LinkProt deposition date | 2016-08-19 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| EJ | PF00089 | Trypsin | Trypsin |
| EJ | PF00014 | Kunitz_BPTI | Kunitz/Bovine pancreatic trypsin inhibitor domain |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | ||
| Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases |
#chains in the LinkProt database with same CATH superfamily 1SLV AB; 1AQ7 AB; 3FP7 EJ; 1AKS AB; 3FP7 EI; 3FP7 EIJ; #chains in the LinkProt database with same CATH topology 1SLV AB; 1AQ7 AB; 3FP7 EJ; 1AKS AB; 3FP7 EI; 3FP7 EIJ; #chains in the LinkProt database with same CATH homology 1SLV AB; 1AQ7 AB; 3FP7 EJ; 1AKS AB; 3FP7 EI; 3FP7 EIJ;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
