1R4CBDEG

N-truncated human cystatin c; dimeric form with 3d domain swapping
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  Link data interpretation
Link type Probability Chain B piercings Chain D piercings Chain E piercings Chain G piercings
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
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Other Other 36% -47D -120D -121E -121E -121G -120B -121B -120D
Interpreting sequences
Chain B Sequence
GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA
Chain B Sequence
GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA
Chain B Sequence
GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA
Chain B Sequence
GGPMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTCQDA
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sequence length 110,110,110,110
structure length 110,110,110,110
publication title Domain swapping in N-truncated human cystatin C.
pubmed doi rcsb
molecule tags Hydrolase inhibitor
molecule keywords Cystatin C
source organism Homo sapiens
pdb deposition date2003-10-06
LinkProt deposition date2016-08-22

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
BDEG PF00031 CystatinCystatin domain
BDEG PF00031 CystatinCystatin domain
BDEG PF00031 CystatinCystatin domain
BDEG PF00031 CystatinCystatin domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.450.10 Alpha Beta Roll Nuclear Transport Factor 2; Chain: A, Nuclear Transport Factor 2; Chain: A, 1r4cB00
3.10.450.10 Alpha Beta Roll Nuclear Transport Factor 2; Chain: A, Nuclear Transport Factor 2; Chain: A, 1r4cD00
3.10.450.10 Alpha Beta Roll Nuclear Transport Factor 2; Chain: A, Nuclear Transport Factor 2; Chain: A, 1r4cE00
3.10.450.10 Alpha Beta Roll Nuclear Transport Factor 2; Chain: A, Nuclear Transport Factor 2; Chain: A, 1r4cG00
1R4CACGH 1R4CBCE 1R4CADEF 1R4CABEH 1R4CEF 1R4CACDH 1R4CBEG 1R4CCDG 1R4CBF 1R4CACDG 1R4CCEGH 1R4CBCEF 1R4CBCF 1R4CABFG 1R4CBCDG 1R4CACEH 1R4CBC 1R4CADE 1R4CAH 1R4CCFGH 1R4CAFG 1R4CADH 1R4CFGH 1R4CABCD 1R4CCDGH 1R4CAEH 1R4CBDG 1R4CABE 1R4CFG 1R4CBGH 1R4CABDE 1R4CCEG 1R4CACF 1R4CEGH 1R4CBFH 1R4CBEFH 1R4CBCGH 1R4CACEF 1R4CABDH 1R4CADGH 1R4CABEF 1R4CAC 1R4CACE 1R4CADEG 1R4CDEG 1R4CAFGH 1R4CAE 1R4CBCDH 1R4CBG 1R4CABFH 1R4CAD 1R4CDFG 1R4CBCG 1R4CACFH 1R4CACH 1R4CBDH 1R4CBCDF 1R4CADFG 1R4CADF 1R4CABF 1R4CABCE 1R4CBDEG 1R4CCDFG 1R4CABG 1R4CAEG 1R4CBDF 1R4CABCH 1R4CAEFH 1R4CBEGH 1R4CDFGH 1R4CAEFG 1R4CBCFH 1R4CBFGH 1R4CABCF 1R4CCD 1R4CCEFG 1R4CAFH 1R4CBCEH 1R4CADFH 1R4CACG 1R4CABDG 1R4CFH 1R4CBDEH 1R4CBH 1R4CABEG 1R4CACD 1R4CBD 1R4CACDE 1R4CAG 1R4CCGH 1R4CBCFG 1R4CCDEG 1R4CBEFG 1R4CEFH 1R4CEFG 1R4CBCD 1R4CEG 1R4CBCDE 1R4CBEF 1N9JAB 1R4CEFGH 1R4CACDF 1R4CABD 1R4CADG 1R4CAF 1R4CAGH 1R4CBDFG 1R4CDG 1R4CBDEF 1R4CAEF 1R4CBDE 1R4CABC 1R4CBEH 1R4CBDGH 1R4CBFG 1R4CBCEG 1R4CAEGH 1R4CABH 1R4CABCG 1R4CCG 1R4CDEGH 1R4CEH 1R4CACEG 1R4CDGH 1R4CABDF 1R4CBCH 1R4CADEH 1R4CCFG 1R4CABGH 1R4CGH 1R4CBE 1R4CAB 1R4CBDFH 1R4CACFG 1R4CDEFG
chains in the LinkProt database with same CATH superfamily
1R4CACGH 1R4CBCE 1R4CADEF 1R4CABEH 1R4CEF 1R4CACDH 1R4CBEG 1R4CCDG 1R4CBF 1R4CACDG 1R4CCEGH 1R4CBCEF 1R4CBCF 1R4CABFG 1A2VABE 1R4CBCDG 1R4CACEH 1R4CBC 1R4CADE 1R4CAH 1R4CCFGH 1R4CAFG 3DMCAB 1R4CFGH 1R4CABCD 1R4CCDGH 1R4CAEH 1R4CBDG 1R4CABE 1A2VABF 1R4CFG 1A2VCEF 1R4CBGH 1R4CABDE 1A2VEF 1R4CCEG 1R4CACF 1R4CEGH 1A2VABC 1R4CBFH 1R4CBEFH 1R4CBCGH 1R4CACEF 1R4CABDH 1R4CAE 1R4CADGH 1R4CABEF 1R4CAC 1R4CACE 1R4CADEG 1R4CDEG 1R4CAFGH 3ALAFG 1R4CBCDH 1R4CBG 1R4CABFH 1R4CAD 1R4CDFG 1A2VBEF 1R4CBCG 1R4CACFH 1R4CACH 1A2VBCD 1R4CBDH 1R4CBCDF 1R4CADFG 1R4CADF 1R4CABF 1R4CABCE 1R4CBDEG 1R4CCDFG 1R4CABG 1R4CAEG 1R4CBDF 1R4CABCH 1R4CAEFH 1R4CBEGH 1R4CDFGH 1R4CAEFG 1R4CBCFH 1R4CBFGH 1R4CABCF 1R4CCD 1R4CCEFG 1R4CAFH 1R4CBCEH 1R4CADFH 1R4CBCH 1A2VAB 1R4CABDG 1R4CBCFG 1R4CBDEH 1R4CBH 1R4CABEG 1R4CACD 1R4CBD 1R4CACDE 1R4CAG 1R4CCGH 1R4CFH 1R4CCDEG 1R4CBEFG 1R4CEFH 1A2VCD 1R4CEFG 1R4CBCD 1A2VAEF 1R4CEG 1R4CBCDE 1R4CBEF 1N9JAB 1R4CEFGH 1R4CACDF 1R4CABD 1R4CADG 1R4CAF 1R4CAGH 1R4CBDFG 1R4CDG 1R4CBDEF 1R4CAEF 1R4CBDE 1R4CABC 1R4CBEH 1R4CBDGH 1A2VABD 1R4CBFG 1A2VCDE 1R4CAEGH 1R4CABH 1R4CABCG 1R4CCG 1A2VDEF 1R4CDEGH 1R4CEH 1A2VACD 1R4CACEG 1R4CADH 1A2VCDF 1R4CBCEG 1R4CDGH 1R4CABDF 1R4CACG 1R4CADEH 1R4CCFG 1R4CABGH 1R4CGH 1R4CBE 1R4CAB 1R4CBDFH 1R4CACFG 1R4CDEFG
chains in the LinkProt database with same CATH topology
1R4CACGH 1R4CBCE 1R4CADEF 1R4CABEH 1R4CEF 1R4CACDH 1R4CBEG 1R4CCDG 1R4CBF 1R4CACDG 1R4CCEGH 1R4CBCEF 1R4CBCF 1R4CABFG 1A2VABE 1R4CBCDG 1R4CACEH 1R4CBC 1R4CADE 1R4CAH 1R4CCFGH 1R4CAFG 3DMCAB 1R4CFGH 1R4CABCD 1R4CCDGH 1R4CAEH 1R4CBDG 1R4CABE 1A2VABF 1R4CFG 1A2VCEF 1R4CBGH 1R4CABDE 1A2VEF 1R4CCEG 1R4CACF 1R4CEGH 1A2VABC 1R4CBFH 1R4CBEFH 1R4CBCGH 1R4CACEF 1R4CABDH 1R4CAE 1R4CADGH 1R4CABEF 1R4CAC 1R4CACE 1R4CADEG 1R4CDEG 1R4CAFGH 3ALAFG 1R4CBCDH 1R4CBG 1R4CABFH 1R4CAD 1R4CDFG 1A2VBEF 1R4CBCG 1R4CACFH 1R4CACH 1A2VBCD 1R4CBDH 1R4CBCDF 1R4CADFG 1R4CADF 1R4CABF 1R4CABCE 1R4CBDEG 1R4CCDFG 1R4CABG 1R4CAEG 1R4CBDF 1R4CABCH 1R4CAEFH 1R4CBEGH 1R4CDFGH 1R4CAEFG 1R4CBCFH 1R4CBFGH 1R4CABCF 1R4CCD 1R4CCEFG 1R4CAFH 1R4CBCEH 1R4CADFH 1R4CBCH 1A2VAB 1R4CABDG 1R4CBCFG 1R4CBDEH 1R4CBH 1R4CABEG 1R4CACD 1R4CBD 1R4CACDE 1R4CAG 1R4CCGH 1R4CFH 1R4CCDEG 1R4CBEFG 1R4CEFH 1A2VCD 1R4CEFG 1R4CBCD 1A2VAEF 1R4CEG 1R4CBCDE 1R4CBEF 1N9JAB 1R4CEFGH 1R4CACDF 1R4CABD 1R4CADG 1R4CAF 1R4CAGH 1R4CBDFG 1R4CDG 1R4CBDEF 1R4CAEF 1R4CBDE 1R4CABC 1R4CBEH 1R4CBDGH 1A2VABD 1R4CBFG 1A2VCDE 1R4CAEGH 1R4CABH 1R4CABCG 1R4CCG 1A2VDEF 1R4CDEGH 1R4CEH 1A2VACD 1R4CACEG 1R4CADH 1A2VCDF 1R4CBCEG 1R4CDGH 1R4CABDF 1R4CACG 1R4CADEH 1R4CCFG 1R4CABGH 1R4CGH 1R4CBE 1R4CAB 1R4CBDFH 1R4CACFG 1R4CDEFG
chains in the LinkProt database with same CATH homology

  
#chains in the LinkProt database with same CATH superfamily
 1R4C ACGH;  1R4C BCE;  1R4C ADEF;  1R4C ABEH;  1R4C EF;  1R4C ACDH;  1R4C BEG;  1R4C CDG;  1R4C BF;  1R4C ACDG;  1R4C CEGH;  1R4C BCEF;  1R4C BCF;  1R4C ABFG;  1R4C BCDG;  1R4C ACEH;  1R4C BC;  1R4C ADE;  1R4C AH;  1R4C CFGH;  1R4C AFG;  1R4C ADH;  1R4C FGH;  1R4C ABCD;  1R4C CDGH;  1R4C AEH;  1R4C BDG;  1R4C ABE;  1R4C FG;  1R4C BGH;  1R4C ABDE;  1R4C CEG;  1R4C ACF;  1R4C EGH;  1R4C BFH;  1R4C BEFH;  1R4C BCGH;  1R4C ACEF;  1R4C ABDH;  1R4C ADGH;  1R4C ABEF;  1R4C AC;  1R4C ACE;  1R4C ADEG;  1R4C DEG;  1R4C AFGH;  1R4C AE;  1R4C BCDH;  1R4C BG;  1R4C ABFH;  1R4C AD;  1R4C DFG;  1R4C BCG;  1R4C ACFH;  1R4C ACH;  1R4C BDH;  1R4C BCDF;  1R4C ADFG;  1R4C ADF;  1R4C ABF;  1R4C ABCE;  1R4C BDEG;  1R4C CDFG;  1R4C ABG;  1R4C AEG;  1R4C BDF;  1R4C ABCH;  1R4C AEFH;  1R4C BEGH;  1R4C DFGH;  1R4C AEFG;  1R4C BCFH;  1R4C BFGH;  1R4C ABCF;  1R4C CD;  1R4C CEFG;  1R4C AFH;  1R4C BCEH;  1R4C ADFH;  1R4C ACG;  1R4C ABDG;  1R4C FH;  1R4C BDEH;  1R4C BH;  1R4C ABEG;  1R4C ACD;  1R4C BD;  1R4C ACDE;  1R4C AG;  1R4C CGH;  1R4C BCFG;  1R4C CDEG;  1R4C BEFG;  1R4C EFH;  1R4C EFG;  1R4C BCD;  1R4C EG;  1R4C BCDE;  1R4C BEF;  1N9J AB;  1R4C EFGH;  1R4C ACDF;  1R4C ABD;  1R4C ADG;  1R4C AF;  1R4C AGH;  1R4C BDFG;  1R4C DG;  1R4C BDEF;  1R4C AEF;  1R4C BDE;  1R4C ABC;  1R4C BEH;  1R4C BDGH;  1R4C BFG;  1R4C BCEG;  1R4C AEGH;  1R4C ABH;  1R4C ABCG;  1R4C CG;  1R4C DEGH;  1R4C EH;  1R4C ACEG;  1R4C DGH;  1R4C ABDF;  1R4C BCH;  1R4C ADEH;  1R4C CFG;  1R4C ABGH;  1R4C GH;  1R4C BE;  1R4C AB;  1R4C BDFH;  1R4C ACFG;  1R4C DEFG; 
#chains in the LinkProt database with same CATH topology
 1R4C ACGH;  1R4C BCE;  1R4C ADEF;  1R4C ABEH;  1R4C EF;  1R4C ACDH;  1R4C BEG;  1R4C CDG;  1R4C BF;  1R4C ACDG;  1R4C CEGH;  1R4C BCEF;  1R4C BCF;  1R4C ABFG;  1A2V ABE;  1R4C BCDG;  1R4C ACEH;  1R4C BC;  1R4C ADE;  1R4C AH;  1R4C CFGH;  1R4C AFG;  3DMC AB;  1R4C FGH;  1R4C ABCD;  1R4C CDGH;  1R4C AEH;  1R4C BDG;  1R4C ABE;  1A2V ABF;  1R4C FG;  1A2V CEF;  1R4C BGH;  1R4C ABDE;  1A2V EF;  1R4C CEG;  1R4C ACF;  1R4C EGH;  1A2V ABC;  1R4C BFH;  1R4C BEFH;  1R4C BCGH;  1R4C ACEF;  1R4C ABDH;  1R4C AE;  1R4C ADGH;  1R4C ABEF;  1R4C AC;  1R4C ACE;  1R4C ADEG;  1R4C DEG;  1R4C AFGH;  3ALA FG;  1R4C BCDH;  1R4C BG;  1R4C ABFH;  1R4C AD;  1R4C DFG;  1A2V BEF;  1R4C BCG;  1R4C ACFH;  1R4C ACH;  1A2V BCD;  1R4C BDH;  1R4C BCDF;  1R4C ADFG;  1R4C ADF;  1R4C ABF;  1R4C ABCE;  1R4C BDEG;  1R4C CDFG;  1R4C ABG;  1R4C AEG;  1R4C BDF;  1R4C ABCH;  1R4C AEFH;  1R4C BEGH;  1R4C DFGH;  1R4C AEFG;  1R4C BCFH;  1R4C BFGH;  1R4C ABCF;  1R4C CD;  1R4C CEFG;  1R4C AFH;  1R4C BCEH;  1R4C ADFH;  1R4C BCH;  1A2V AB;  1R4C ABDG;  1R4C BCFG;  1R4C BDEH;  1R4C BH;  1R4C ABEG;  1R4C ACD;  1R4C BD;  1R4C ACDE;  1R4C AG;  1R4C CGH;  1R4C FH;  1R4C CDEG;  1R4C BEFG;  1R4C EFH;  1A2V CD;  1R4C EFG;  1R4C BCD;  1A2V AEF;  1R4C EG;  1R4C BCDE;  1R4C BEF;  1N9J AB;  1R4C EFGH;  1R4C ACDF;  1R4C ABD;  1R4C ADG;  1R4C AF;  1R4C AGH;  1R4C BDFG;  1R4C DG;  1R4C BDEF;  1R4C AEF;  1R4C BDE;  1R4C ABC;  1R4C BEH;  1R4C BDGH;  1A2V ABD;  1R4C BFG;  1A2V CDE;  1R4C AEGH;  1R4C ABH;  1R4C ABCG;  1R4C CG;  1A2V DEF;  1R4C DEGH;  1R4C EH;  1A2V ACD;  1R4C ACEG;  1R4C ADH;  1A2V CDF;  1R4C BCEG;  1R4C DGH;  1R4C ABDF;  1R4C ACG;  1R4C ADEH;  1R4C CFG;  1R4C ABGH;  1R4C GH;  1R4C BE;  1R4C AB;  1R4C BDFH;  1R4C ACFG;  1R4C DEFG; 
#chains in the LinkProt database with same CATH homology
 1R4C ACGH;  1R4C BCE;  1R4C ADEF;  1R4C ABEH;  1R4C EF;  1R4C ACDH;  1R4C BEG;  1R4C CDG;  1R4C BF;  1R4C ACDG;  1R4C CEGH;  1R4C BCEF;  1R4C BCF;  1R4C ABFG;  1A2V ABE;  1R4C BCDG;  1R4C ACEH;  1R4C BC;  1R4C ADE;  1R4C AH;  1R4C CFGH;  1R4C AFG;  3DMC AB;  1R4C FGH;  1R4C ABCD;  1R4C CDGH;  1R4C AEH;  1R4C BDG;  1R4C ABE;  1A2V ABF;  1R4C FG;  1A2V CEF;  1R4C BGH;  1R4C ABDE;  1A2V EF;  1R4C CEG;  1R4C ACF;  1R4C EGH;  1A2V ABC;  1R4C BFH;  1R4C BEFH;  1R4C BCGH;  1R4C ACEF;  1R4C ABDH;  1R4C AE;  1R4C ADGH;  1R4C ABEF;  1R4C AC;  1R4C ACE;  1R4C ADEG;  1R4C DEG;  1R4C AFGH;  3ALA FG;  1R4C BCDH;  1R4C BG;  1R4C ABFH;  1R4C AD;  1R4C DFG;  1A2V BEF;  1R4C BCG;  1R4C ACFH;  1R4C ACH;  1A2V BCD;  1R4C BDH;  1R4C BCDF;  1R4C ADFG;  1R4C ADF;  1R4C ABF;  1R4C ABCE;  1R4C BDEG;  1R4C CDFG;  1R4C ABG;  1R4C AEG;  1R4C BDF;  1R4C ABCH;  1R4C AEFH;  1R4C BEGH;  1R4C DFGH;  1R4C AEFG;  1R4C BCFH;  1R4C BFGH;  1R4C ABCF;  1R4C CD;  1R4C CEFG;  1R4C AFH;  1R4C BCEH;  1R4C ADFH;  1R4C BCH;  1A2V AB;  1R4C ABDG;  1R4C BCFG;  1R4C BDEH;  1R4C BH;  1R4C ABEG;  1R4C ACD;  1R4C BD;  1R4C ACDE;  1R4C AG;  1R4C CGH;  1R4C FH;  1R4C CDEG;  1R4C BEFG;  1R4C EFH;  1A2V CD;  1R4C EFG;  1R4C BCD;  1A2V AEF;  1R4C EG;  1R4C BCDE;  1R4C BEF;  1N9J AB;  1R4C EFGH;  1R4C ACDF;  1R4C ABD;  1R4C ADG;  1R4C AF;  1R4C AGH;  1R4C BDFG;  1R4C DG;  1R4C BDEF;  1R4C AEF;  1R4C BDE;  1R4C ABC;  1R4C BEH;  1R4C BDGH;  1A2V ABD;  1R4C BFG;  1A2V CDE;  1R4C AEGH;  1R4C ABH;  1R4C ABCG;  1R4C CG;  1A2V DEF;  1R4C DEGH;  1R4C EH;  1A2V ACD;  1R4C ACEG;  1R4C ADH;  1A2V CDF;  1R4C BCEG;  1R4C DGH;  1R4C ABDF;  1R4C ACG;  1R4C ADEH;  1R4C CFG;  1R4C ABGH;  1R4C GH;  1R4C BE;  1R4C AB;  1R4C BDFH;  1R4C ACFG;  1R4C DEFG;
Warning
  • This is a unique chain - no homologues found.

 
How to cite
LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling