| Link type | Probability | Chain Q piercings | Chain V piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Unlink | 87% | +26V -37V | |||||||||
| view details |
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Unlink | 87% | +26V -37V | |||||||||
| view details |
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Unlink | 87% | +26V -37V | |||||||||
| view details |
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Unlink | 87% | +26V -37V | |||||||||
Chain Q Sequence |
SSLIKKIEENERKDTLNTLQNMFPDMDPSLIEDVCIAAAS--GPCVD |
Chain Q Sequence |
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL |
| sequence length | 47,73 |
| structure length | 45,73 |
| publication title |
Mechanism of Ubiquitin Recognition by the CUE Domain of Vps9p.
pubmed doi rcsb |
| molecule tags | Translation |
| molecule keywords | Vacuolar protein sorting-associated protein VPS9 |
| source organism | Saccharomyces cerevisiae |
| missing residues | Q: 437-440 |
| pdb deposition date | 2003-04-18 |
| LinkProt deposition date | 2016-10-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| QV | PF02845 | CUE | CUE domain |
| QV | PF00240 | ubiquitin | Ubiquitin family |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein; domain 3 | DNA helicase RuvA subunit, C-terminal domain | ||
| Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 |
#chains in the LinkProt database with same CATH superfamily 2G45 ABDE; 2G45 ADE; 2G45 ABE; 2G45 AE; 2G45 DE; 2G45 ABD; 1P3Q QV; 1AAR AB; 2G45 AB; 1P3Q RV; 2G45 BDE; 1P3Q QR; 1P3Q QRV; 2G45 BD; #chains in the LinkProt database with same CATH topology 1K50 AC; 1K50 BD; 1Q10 AB; 2G45 AB; 1K50 ACD; 1K50 BC; 1P3Q QRV; 1K50 AD; 3DZD AB; 1K50 ABCD; 1K50 AB; 1K50 ABD; 2G45 DE; 2G45 BDE; 1K50 CD; 2G45 ABD; 2G45 ADE; 2G45 AE; 1AAR AB; 1P3Q RV; 2HJ1 AB; 1K50 ABC; 2G45 ABE; 1K50 BCD; 1P3Q QV; 2G45 ABDE; 1P3Q QR; 2G45 BD; #chains in the LinkProt database with same CATH homology 2G45 ABDE; 2G45 ADE; 2G45 ABE; 2G45 AE; 2G45 DE; 2G45 ABD; 1P3Q QV; 1AAR AB; 2G45 AB; 1P3Q RV; 2G45 BDE; 1P3Q QR; 1P3Q QRV; 2G45 BD;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
