| Link type | Probability | Chain A piercings | Chain B piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
|
Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
| view details |
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Unlink | 44% | +239A -269A +344A -537A | |||||||||
Chain A Sequence |
EDTAKDNYGKLPLIQSRDSDRTGQKRVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP |
Chain A Sequence |
EDTAKDNYGKLPLIQSRDSDRTGQKRVKFVDLDEAKDSDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP |
| sequence length | 490,490 |
| structure length | 490,490 |
| publication title |
Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp).
pubmed rcsb |
| molecule tags | Complex (aminoacyl-trna synthase/trna) |
| molecule keywords | T-RNA (75-MER) |
| source organism | Saccharomyces cerevisiae |
| ec nomenclature |
ec 6.1.1.12: Aspartate--tRNA ligase. ec 6.1.1.12: Aspartate--tRNA ligase. |
| pdb deposition date | 1995-01-19 |
| LinkProt deposition date | 2016-08-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| AB | PF00152 | tRNA-synt_2 | tRNA synthetases class II (D, K and N) |
| AB | PF01336 | tRNA_anti-codon | OB-fold nucleic acid binding domain |
| AB | PF00152 | tRNA-synt_2 | tRNA synthetases class II (D, K and N) |
| AB | PF01336 | tRNA_anti-codon | OB-fold nucleic acid binding domain |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | ||
| Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein; domain 2 | Bira Bifunctional Protein; Domain 2 | ||
| Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | ||
| Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein; domain 2 | Bira Bifunctional Protein; Domain 2 |
#chains in the LinkProt database with same CATH superfamily 1ASZ AB; 1ASY AB; 1ATI AB; #chains in the LinkProt database with same CATH topology 1ASY AB; 1ATI AB; 1Y8P AB; 1Y8N AB; 1ASZ AB; 1Y8O AB; 1SND AB; #chains in the LinkProt database with same CATH homology 1ASZ AB; 1ASY AB; 1ATI AB;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
