2HJ1AB

Crystal structure of a 3d domain-swapped dimer of protein hi0395 from haemophilus influenzae
Link type Probability Chain A piercings Chain B piercings
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Solomon.1 Solomon.1 64% -63B -83B -63A -80A
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Solomon.1 Solomon.1 64% -63B -83B -63A -80A
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Solomon.1 Solomon.1 64% -63B -83B -63A -80A
view details
Solomon.1 Solomon.1 64% -63B -83B -63A -80A
view details
Solomon.1 Solomon.1 64% -63B -83B -63A -80A
view details
Solomon.1 Solomon.1 64% -63B -83B -63A -80A
view details
Solomon.1 Solomon.1 64% -63B -83B -63A -80A
view details
Solomon.1 Solomon.1 64% -63B -83B -63A -80A
Interpreting sequences
Chain A Sequence
NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL
Chain A Sequence
LNQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLLAD
sequence length 77,80
structure length 77,80
publication title Crystal structure of a 3D domain-swapped dimer of hypothetical protein from Haemophilus influenzae (CASP Target)
rcsb
molecule tags Structural genomics, unknown function
molecule keywords Hypothetical protein
source organism Haemophilus influenzae
pdb deposition date2006-06-29
LinkProt deposition date2016-10-29

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AB PF03658 Ub-RnfHRnfH family Ubiquitin
AB PF03658 Ub-RnfHRnfH family Ubiquitin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.20.280 Alpha Beta Roll Ubiquitin-like (UB roll) 3d domain-swapped dimer of a hypothetical protein 2hj1A00
3.10.20.280 Alpha Beta Roll Ubiquitin-like (UB roll) 3d domain-swapped dimer of a hypothetical protein 2hj1B00
2HJ1AB
chains in the LinkProt database with same CATH superfamily
1K50AC 1K50BD 1Q10AB 2G45AB 1K50ACD 1K50BC 1P3QQRV 1K50AD 1K50ABCD 1K50AB 1K50ABD 2G45DE 2G45BDE 1K50CD 2G45ABD 2G45ADE 2G45AE 1AARAB 1P3QRV 2HJ1AB 1K50ABC 2G45ABE 1K50BCD 1P3QQV 2G45ABDE 2G45BD
chains in the LinkProt database with same CATH topology
2HJ1AB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 2HJ1 AB; 
#chains in the LinkProt database with same CATH topology
 1K50 AC;  1K50 BD;  1Q10 AB;  2G45 AB;  1K50 ACD;  1K50 BC;  1P3Q QRV;  1K50 AD;  1K50 ABCD;  1K50 AB;  1K50 ABD;  2G45 DE;  2G45 BDE;  1K50 CD;  2G45 ABD;  2G45 ADE;  2G45 AE;  1AAR AB;  1P3Q RV;  2HJ1 AB;  1K50 ABC;  2G45 ABE;  1K50 BCD;  1P3Q QV;  2G45 ABDE;  2G45 BD; 
#chains in the LinkProt database with same CATH homology
 2HJ1 AB; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling