3J03FGI

Lidless mm-cpn in the closed state with atp/alfx
Link type Probability Chain F piercings Chain G piercings Chain I piercings
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
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Unlink Unlink 54% -3930F +4420F
Interpreting sequences
Chain F Sequence
VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE
Chain F Sequence
VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE
Chain F Sequence
VLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVITNIKDLSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAE
sequence length 491,491,491
structure length 491,491,491
publication title Cryo-EM structure of a group II chaperonin in the prehydrolysis ATP-bound state leading to lid closure.
pubmed doi rcsb
molecule tags Chaperone
molecule keywords Lidless Mm-cpn
source organism Methanococcus maripaludis
pdb deposition date2011-02-10
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
FGI PF00118 Cpn60_TCP1TCP-1/cpn60 chaperonin family
FGI PF00118 Cpn60_TCP1TCP-1/cpn60 chaperonin family
FGI PF00118 Cpn60_TCP1TCP-1/cpn60 chaperonin family
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling