3GZTJL

Vp7 recoated rotavirus dlp
Link type Probability Chain J piercings Chain L piercings
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
view details
Unlink Unlink 59% +185L -225L +252L -312L
Interpreting sequences
Chain J Sequence
PITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQLDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK
Chain J Sequence
PITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQLDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK
sequence length 255,255
structure length 255,255
publication title Molecular interactions in rotavirus assembly and uncoating seen by high-resolution cryo-EM
pubmed doi rcsb
molecule tags Virus
molecule keywords Outer capsid glycoprotein VP7
pdb deposition date2009-04-07
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
JL PF00434 VP7Glycoprotein VP7
JL PF00434 VP7Glycoprotein VP7
Image from the rcsb pdb (www.rcsb.org)

3FMGA 4V7QBA 4V7QBF 4V7QBG 4V7QBH 4V7QBI 4V7QBJ 4V7QBK 4V7QBL 4V7QBM 4V7QBN 4V7QBO 4V7QBP 4V7QBQ 3GZTB 3GZTF 3GZTG 3GZTH 3GZTI 3GZTK 3GZTL 3GZTM 3GZTN 3GZTO 3GZTP 3GZTQ 3FMGA 4V7QBA 4V7QBF 4V7QBG 4V7QBH 4V7QBI 4V7QBJ 4V7QBK 4V7QBL 4V7QBM 4V7QBN 4V7QBO 4V7QBP 4V7QBQ 3GZTB 3GZTF 3GZTG 3GZTH 3GZTI 3GZTJ 3GZTK 3GZTM 3GZTN 3GZTO 3GZTP 3GZTQ
similar chains in the pdb database (40% sequence similarity)

 
            
               
               
           
#similar chains in the pdb database (40% sequence similarity)
 3FMG_A;  4V7Q_BA;  4V7Q_BF;  4V7Q_BG;  4V7Q_BH;  4V7Q_BI;  4V7Q_BJ;  4V7Q_BK;  4V7Q_BL;  4V7Q_BM;  4V7Q_BN;  4V7Q_BO;  4V7Q_BP;  4V7Q_BQ;  3GZT_B;  3GZT_F;  3GZT_G;  3GZT_H;  3GZT_I;  3GZT_K;  3GZT_L;  3GZT_M;  3GZT_N;  3GZT_O;  3GZT_P;  3GZT_Q;  3FMG_A;  4V7Q_BA;  4V7Q_BF;  4V7Q_BG;  4V7Q_BH;  4V7Q_BI;  4V7Q_BJ;  4V7Q_BK;  4V7Q_BL;  4V7Q_BM;  4V7Q_BN;  4V7Q_BO;  4V7Q_BP;  4V7Q_BQ;  3GZT_B;  3GZT_F;  3GZT_G;  3GZT_H;  3GZT_I;  3GZT_J;  3GZT_K;  3GZT_M;  3GZT_N;  3GZT_O;  3GZT_P;  3GZT_Q; 
           

LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling