3DKNAC

Sec61 in the canine ribosome-channel complex from the endoplasmic reticulum
Link type Probability Chain A piercings Chain C piercings
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
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Unlink Unlink 40% +13A +156A -257A +338A -375A -431A
Interpreting sequences
Chain A Sequence
KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL
Chain A Sequence
ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF
sequence length 430,32
structure length 430,32
publication title Single copies of Sec61 and TRAP associate with a nontranslating mammalian ribosome.
pubmed doi rcsb
molecule tags Protein transport/rna
molecule keywords RNA (5'-R(P*CP*GP*UP*GP*CP*CP*AP*AP*GP*CP*UP*GP*CP*GP*AP*UP*
pdb deposition date2008-06-25
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AC PF00344 SecYSecY translocase
AC PF03911 Sec61_betaSec61beta family
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling