3DIEAB

Domain swapping of staphylococcus aureus thioredoxin w28a mutant
Link type Probability Chain A piercings Chain B piercings
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Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
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Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
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Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
view details
Hopf.1 Hopf.1 39% +25B -37B +54B +24A +61A -104A
Interpreting sequences
Chain A Sequence
SHMAIVKVTDADFDSKVESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
Chain A Sequence
SHMAIVKVTDADFDSKVESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
sequence length 106,106
structure length 106,106
publication title Coupling of domain swapping to kinetic stability in a thioredoxin mutant
pubmed doi rcsb
molecule tags Electron transport
molecule keywords Thioredoxin
source organism Staphylococcus aureus
pdb deposition date2008-06-20
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AB PF00085 ThioredoxinThioredoxin
AB PF00085 ThioredoxinThioredoxin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin Glutaredoxin 3dieA01
3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin Glutaredoxin 3dieB01
3HXSAB 1OC3ABC 1OC3AC 1A0RBGP 1OC3BC 1QQ2AB 1A0RBP 3DIEAB
chains in the LinkProt database with same CATH superfamily
3HXSAB 1OC3ABC 1OC3AC 1A0RBGP 1OC3BC 1QQ2AB 1A0RBP 3DIEAB
chains in the LinkProt database with same CATH topology
3HXSAB 1OC3ABC 1OC3AC 1A0RBGP 1OC3BC 1QQ2AB 1A0RBP 3DIEAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 3HXS AB;  1OC3 ABC;  1OC3 AC;  1A0R BGP;  1OC3 BC;  1QQ2 AB;  1A0R BP;  3DIE AB; 
#chains in the LinkProt database with same CATH topology
 3HXS AB;  1OC3 ABC;  1OC3 AC;  1A0R BGP;  1OC3 BC;  1QQ2 AB;  1A0R BP;  3DIE AB; 
#chains in the LinkProt database with same CATH homology
 3HXS AB;  1OC3 ABC;  1OC3 AC;  1A0R BGP;  1OC3 BC;  1QQ2 AB;  1A0R BP;  3DIE AB; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling