| Link type | Probability | Loop ranges | Chain A piercings | Chain C piercings | Chain E piercings | Chain F piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
|
Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
| view details |
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Other | 43% | -A | +1334E +1334E +383F -397F +508F -518F +529F +652F -703F +1062F -1076F +1153F -1176F +1212F | -1333F | ||||||||||
Chain A Sequence |
TKLHNTIFSETRKFTRESFKEIEHLTARLANDRVARHDFLFNTSIVLISDYSGEDSNGNQLQATITIPNEIINPKEYDPSDYPLAEDESFFKQGHKYDYLVTFRAGSLTNTYEPKTKMYKLHAALDKLMHVKQRKSRFADLWRELCAVIASLDVWYQTTNYPLRTYVKLLFHKGDEFPFYESPSQDRIIFNDKSVASILPTFVYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEKLKIKGIGRSWYQEALHNVCQATVPVWSQFNEVIGHRTKSTSEPHFVSSTFISLRAKRAELLYPEFNAYINRAIQLSKTQNDVANYYAACRAMTNDGTFLATLTELSLDAAVFPRIEQHLVTRPAVLMSNTRHESLKQKYTNGVGSIAQSYLSSFTDEIAKRVNGRHHDEAWLNFLTTSSPGRKLTEIEKLEVGGDVAAWSNSRIVMQAVFAREYRTPERIFKSLKAPIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIYELNDNAAQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFEAGNRQSQVRYVNAAWQACALEAANSQTSTSYESEIFGQVKNAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLATIKILGDDIMEIFQGSESDTYDHAVSNASILNESGFATTAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIGRLNLAMMELNALIDDLVFRVRRPEGLKMLGFFCGAICLRRFTLSVDNKLYDSTYNNLSKYMTLTKYDKNPDSDSTLMSLILPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYKRRLLYDVSNIGEMIQQNSMALDDDLLHEYGFTGALLLIDLNILDLIDEVKKEDISPVKVSELATSLEQLGKLGEREKSRRAASDLKIRGHALSNDIVYGYGLQEKIQKSAMATKETTVQSKRVSSRLHDVIVAKTRDYKISTIPADALHLHEFEVEDVTVDLLPHAKHTSYSSLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASIRGNYHKFSYDDPVFKQGYKIYKSDATLLNDFFTAISAGPKEQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAERLVRIPPKYYVSTQCRALYNIFSYLHILRSIANNRGKRLKMVLHPGLIAYVRG |
Chain A Sequence |
VQSRTDVFNEQFANEALHPMTKVIFNGLDVNTEVQPLSDDFKQISDPKGYLTYSVKYEDQFTKKDKLRASEADDRIVGPTVNLFKYGAAVVNIDLNRDFFDTATGIDLTKGIPLVQDLLVPIGVTAGAEQSAEYVSGLLMVLFKVMTDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQAGTKYGLGLTETRLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQFHGPNQGALRPELAFDHDHIIRCLMLAAANYPRLEGIIVQINTGYVASANVIRPVSEKRYFPENLEQNQSAARLVSAVKARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILFALFFPTEFNRIKGDIQNVLLLFFSRWYPVEYGIFIQRGATYTINAAGEFEFSGRNEKWDQSLYLSEHFPALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTNQRGTVTNEFASRFRTIVATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFSGNHATFKPDQYVITSPEGSYKPIIERQGETVDGLTIIDTSIVWPILCQCTYPLVRQSGKGVDAVSIMEEIVYPDPSTTLSQSLSVAQVLSKLTLPDAFINMILSGGDSVVMRTYQTEADDDLDEGIRMTTYDQYLSHIRERLHITNVPDPIYITGASTPDQIAASVQATHVAVVLYQSGVINGSASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFIQTSDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELRLRRLSVGLRLITNPRIARRFDGVRIMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWVVDIHDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEPSAFDPPASGEDMRLIYPLQPISVARSMRAIVNHNEVDRPRGAVAPSSYEMDTGTLSRNGDLLYSPVANGQVGIPKLEVDHISFSNVVSMMTANIRTGDDMAVERVNPDDVRAINIRNA |
Chain A Sequence |
KVIFNGLDVNTEVQPLSDDFKQISDPKGYLTYSVKYEDQFTKKDKLRASEADDRIVGPTVNLFKYGAAVVNIDLNRDFFDTATGIDLTKGIPLVQDLLVPIGVTAGAEQSAEYVSGLLMVLFKVMTDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQAGTKYGLGLTETRLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQFHGPNQGALRPELAFDHDHIIRCLMLAAANYPRLEGIIVQINTGYVASANVIRPVSEKRYFPENLEQNQSAARLVSAVKARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILFALFFPTEFNRIKGDIQNVLLLFFSRWYPVEYGIFIQRGATYTINAAGEFEFSGRNEKWDQSLYLSEHFPALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTNQRGTVTNEFASRFRTIVATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFSGNHATFKPDQYVITSPEGSYKPIIERQGETVDGLTIIDTSIVWPILCQCTYPLVRQ--------SIMEEIVYPDPSTTLSQSLSVAQVLSKLTLPDAFINMILSGGDSVVMRTYQTEADDDLDEGIRMTTYDQYLSHIRERLHITNVPDPIYITGASTPDQIAASVQATHVAVVLYQSGVINGSASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFIQTSDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELRLRRLSVGLRLITNPRIARRFDGVRIMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWVVDIHDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEPSAFDPPASGEDMRLIYPLQPISVARSMRAIVNHNEVDRPRGAVAPSSYEMDTGTLSRNGDLLYSPVANGQVGIPKLEVDHISFSNVVSMMTANIRTGDDMAVERVNPDDVRAINIRNA |
Chain A Sequence |
KVIFNGLDVNTEVQPLSDDFKQISDPKGYLTYSVKYEDQFTKKDKLRASEADDRIVGPTVNLFKYGAAVVNIDLNRDFFDTATGIDLTKGIPLVQDLLVPIGVTAGAEQSAEYVSGLLMVLFKVMTDNRLVIVGETTTPMSNTLSTVVNNVLRTTYHNNVGVNPALLRDFTQVNWLNRDITNMLQQAGTKYGLGLTETRLDYVRLVKTIVGHALNIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQFHGPNQGALRPELAFDHDHIIRCLMLAAANYPRLEGIIVQINTGYVASANVIRPVSEKRYFPENLEQNQSAARLVSAVKARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILFALFFPTEFNRIKGDIQNVLLLFFSRWYPVEYGIFIQRGATYTINAAGEFEFSGRNEKWDQSLYLSEHFPALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTNQRGTVTNEFASRFRTIVATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFSGNHATFKPDQYVITSPEGSYKPIIERQGETVDGLTIIDTSIVWPILCQCTYPLVRQ--------SIMEEIVYPDPSTTLSQSLSVAQVLSKLTLPDAFINMILSGGDSVVMRTYQTEADDDLDEGIRMTTYDQYLSHIRERLHITNVPDPIYITGASTPDQIAASVQATHVAVVLYQSGVINGSASTYLRENEVLVVMPDYYDVVSRFANANLQMNNNRYHESVLEIADIFDQADFIQTSDAVRQLRALMPTLSTSQIRHAIERIAQITDVDSTDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELRLRRLSVGLRLITNPRIARRFDGVRIMYLTDDDPDPDFVPDVPEGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWVVDIHDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEPSAFDPPASGEDMRLIYPLQPISVARSMRAIVNHNEVDRPRGAVAPSSYEMDTGTLSRNGDLLYSPVANGQVGIPKLEVDHISFSNVVSMMTANIRTGDDMAVERVNPDDVRAINIRNA |
| sequence length | 1208,1220,1199,1199 |
| structure length | 1208,1220,1191,1191 |
| publication title |
Structure of RdRps within a transcribing dsRNA virus provides insights into the mechanisms of RNA synthesis.
pubmed doi rcsb |
| molecule tags | Viral protein/rna |
| molecule keywords | RNA-dependent RNA polymerase |
| source organism | Cypovirus 1 |
| missing residues | E: 777-786 F: 777-786 |
| pdb deposition date | 2019-05-16 |
| LinkProt deposition date | 2019-11-25 |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
