6JJPABEF

Crystal structure of fab of a pd-1 monoclonal antibody mw11-h317 in complex with pd-1
Link type Probability Loop ranges Chain A piercings Chain B piercings Chain E piercings Chain F piercings
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
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Other Other 41% -A -118B +133B -149B +160B -177B +192B -208B -215B -129E +142E -185E +197E -216E -221E +43F +221A
Interpreting sequences
Chain A Sequence
EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVATISGGGSYTYYPDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCASPDSSGVAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Chain A Sequence
DIVMTQSPLSLPVTPGEPASITCKASQDVETVVAWYLQKPGQSPRLLIYWASTRHTGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQYSRYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Chain A Sequence
DIVMTQSPLSLPVTPGEPASITCKASQDVETVVAWYLQKPGQSPRLLIYWASTRHTGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCQQYSRYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
Chain A Sequence
DRPWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTE
sequence length 220,214,213,118
structure length 220,214,213,118
publication title Identification of a monoclonal antibody that targets PD-1 in a manner requiring PD-1 Asn58 glycosylation.
doi rcsb
molecule tags Immune system
molecule keywords Heavy chain of MW11-h317
source organism Homo sapiens
pdb deposition date2019-02-26
LinkProt deposition date2019-11-02
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling