| Link type | Probability | Loop ranges | Chain A piercings | Chain C piercings | Chain E piercings | Chain F piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
|
Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
| view details |
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Other | 40% | -A | -1149C -223E +109F | +223A | +108A +1164C | |||||||||
Chain A Sequence |
QRPTLSEDVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFTTVPGVKEDVTEIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHNPGMHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDAT----RTDFDKLILDVETKNSISPRDALASAGKTLVELFGLAR |
Chain A Sequence |
SNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITVMHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLPDELLEAQPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDVLVDADGKAMLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIELREGEDEDLERAAANLGI |
Chain A Sequence |
GYDTPLGITNPPIDELLDRVSSKYALVIYAAKRARQINDYYNQL------YVGPLVEPGLQEKPLSIALREIHADLLEHTEG |
Chain A Sequence |
DEELTARFERDAIPLLDQLYGGALRMTRNPADAEDLLQETMVKAYAGFRSFRHGTNLKAWLYRILTNTYINSYRKKQRQPAEYPTEQITDWQLASNAEHSSTGLRSAEVEALEALPDTEIKEALQALPEEFRMAVYYADVEGFPYKEIAEIMDTPIGTVMSRLHRGRRQLRGLLA |
| sequence length | 219,1137,82,175 |
| structure length | 215,1137,76,175 |
| publication title |
Structural basis for transcription initiation by bacterial ECF sigma factors
doi rcsb |
| molecule tags | Transcription/dna/rna |
| molecule keywords | DNA-directed RNA polymerase subunit alpha |
| source organism | Mycobacterium tuberculosis h37rv |
| missing residues | A: 181-186 E: 70-77 |
| pdb deposition date | 2018-05-17 |
| LinkProt deposition date | 2019-03-23 |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
