| Link type | Probability | Loop ranges | Chain A piercings | Chain B piercings | Chain D piercings | Chain E piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
|
Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
| view details |
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Other | 36% | -A | +5E -23E +33E -86E +98E | +297A -221D -297E | +3E -99E | |||||||||
Chain A Sequence |
HSTAETTLDSFFSRAGLVGEIDLPLKGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPT-------KDLEYGAMPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL |
Chain A Sequence |
VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDTHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLR |
Chain A Sequence |
DIVLTQSPAIMSASPGEKVTMTCSASSSVSYIHWYQQKSGTSPKRWIYDTSRLAFGVPGRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC |
Chain A Sequence |
EVKLVESGGGSVKPGGSLKLSCAASGFSFSTYGMSWVRQTPEKRLEWVATISGGGGYTYYPDSVKGRFTISRDNARNILYLQMSSLRSGDTAMYYCARRV-----YYFDYWGQGTTLTVSSPKTTPPSVYPLAPA----TNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR |
| sequence length | 225,237,212,220 |
| structure length | 218,237,212,212 |
| publication title |
CRYO-EM structure of EV71 and its neutralizing antibody D6 Fab
rcsb |
| molecule tags | Virus like particle |
| molecule keywords | Capsid protein VP1 |
| source organism | Enterovirus a71 |
| missing residues | A: 210-218 E: 100-106,135-140 |
| pdb deposition date | 2018-05-07 |
| LinkProt deposition date | 2019-12-28 |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
