5VFOSTop

Nucleotide-driven triple-state remodeling of the aaa-atpase channel in the activated human 26s proteasome
Link type Probability Loop ranges Chain S piercings Chain T piercings Chain o piercings Chain p piercings
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Other Other 30% -S -142o +205o +184p -213p
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Other Other 30% -S -142o +205o +184p -213p
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Other Other 30% -S -142o +205o +184p -213p
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Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
view details
Other Other 30% -S -142o +205o +184p -213p
Interpreting sequences
Chain S Sequence
RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD
Chain S Sequence
TQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNWDIAHMI
Chain S Sequence
TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLE
Chain S Sequence
SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD
sequence length 213,215,220,204
structure length 213,215,220,204
publication title Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Proteasome subunit alpha type-6
source organism Homo sapiens
pdb deposition date2017-04-08
LinkProt deposition date2018-07-21
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling