| Link type | Probability | Loop ranges | Chain A piercings | Chain C piercings | Chain D piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
| view details |
|
Hopf.2 U Ring | 32% | -A | -184C +206C -254C -35D +68D -81D | -67D +85D -226D +243D | -244C +261C | ||||||||
Chain A Sequence |
MDTGAKEDEDETANFSDGVTAMGFQSLDTQVSIKDILRRPVLLFNHVELDPDYTGFFIPIMPPSRMMQYKSGDKETSFQRLIGRTPQAAIMNLFRFWRGSLRYTIIIHSTDGHPIYVTHVPHTGNRVYGLMKVNNLHEYTKVPIFGCGLTTEMIIPSVNPSICVEVPFDTENNWAVTFDEDAQRNYSWRDKGDTVTGHLVVTPVVSVYMSVWVEAGDDFEVSNFYGPPSVKTNDWNYAFSDEH |
Chain A Sequence |
DKPKDVSSITIIPKPRLGFPHGKGKSDAVAMRVNPVALTSFQDVSAYPDEPRTTLDIARIWGLRSTFNWGSGDEHGKELFNTVLDPGLRFYDQDYEGQITPMEYVTGLYNFWSGPIELRFDFVSNAFHTGTVIISAEYNRSSTNTDECQSHSTYTKTFHLGEQKSVHFTVPYIYDTVVRRNTASAYLPVTDYDKVDNVSRAQAMGIRAESKMRVKVRVVNVLRPVASTTSTIEVLVYMRGGKNYALHGLKQSTYWPSNSVVPIDSFPPDGYDP |
Chain A Sequence |
DNPHRFLPANVSNRWNEYSSAYLPRV |
| sequence length | 243,273,26 |
| structure length | 243,273,26 |
| publication title |
Virion structure and genome delivery mechanism of sacbrood honeybee virus.
pubmed doi rcsb |
| molecule tags | Virus |
| molecule keywords | structural protein VP1 |
| source organism | Sacbrood virus |
| pdb deposition date | 2017-09-11 |
| LinkProt deposition date | 2018-07-20 |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
