5NT2DEV

Complex of influenza a ns1 with trim25 coiled coil domain
Link type Probability Loop ranges Chain D piercings Chain E piercings Chain V piercings
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
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Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
view details
Hopf.1 U Ring Hopf.1 U Ring 47% -D +79E +76V -236D +362D
Interpreting sequences
Chain D Sequence
NTVSSFQVDCFLWHVRKRVADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILKEESDEALKMTMASVPASRYLTDMTLEEMSREWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTAEDVKNAVGVLIGGLEANDNTVRVSETLQRFAW
Chain D Sequence
PNTVSSFQVDCFLWHVRKRVADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILKEESDEALKMTMASVPASRYLTDMTLEEMSREWSMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTAEDVKNAVGVLIGGLEANDNTVRVSETLQRFAW
Chain D Sequence
SLSQASADLEATLRHKLTVMYSQINGASRALDDVRNRQQDVRMTANRKVEQLQQEYTEMKALLDASETTSTRKIKEEEKRVNSKFDTIYQILLKKKSEIQTLKEEIEQSLTKRDEFEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQSTIDLKNELKQCIGRLQELTPSS
sequence length 200,201,173
structure length 200,201,173
publication title Molecular mechanism of influenza A NS1-mediated TRIM25 recognition and inhibition.
pubmed doi rcsb
molecule tags Ligase
molecule keywords Non-structural protein 1
source organism Influenza a virus (strain a/puerto rico/8/1934 h1n1)
pdb deposition date2017-04-27
LinkProt deposition date2018-05-26
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling