5NI9ABC

Crystal structure of hla-drb1*04:01 with the alpha-enolase peptide 326-340
Link type Probability Loop ranges Chain A piercings Chain B piercings Chain C piercings
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -7B +195B -7C +181C +7C -181C -340A -12B
Interpreting sequences
Chain A Sequence
KEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEF
Chain A Sequence
DTRPRFLEQVKHECHFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQKRAAVDTYCRHNYGVGESFTVQRRVYPEVTVYPAKTQPLQHHNLLVCSVNGFYPGSIEVRWFRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSLTSPLTVEWRASSAD
Chain A Sequence
KRIAKAVNEKSCNC
sequence length 179,193,14
structure length 179,193,14
publication title Memory T cells specific to citrullinated alpha-enolase are enriched in the rheumatic joint.
pubmed doi rcsb
molecule tags Immune system
molecule keywords HLA class II histocompatibility antigen, DR alpha chain
source organism Homo sapiens
pdb deposition date2017-03-23
LinkProt deposition date2018-06-15
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling