5KD4BCDP

Crystal structure of murine mhc-i h-2dd in complex with murine beta2-microglobulin and a variant of peptide (pvi10) of hiv gp120 mn isolate (igpgrafyvi)
Link type Probability Loop ranges Chain B piercings Chain C piercings Chain D piercings Chain P piercings
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
view details
Other Other 31% -B +36C -275C
Interpreting sequences
Chain B Sequence
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Chain B Sequence
SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW
Chain B Sequence
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Chain B Sequence
IGPGRAFYVI
sequence length 99,273,99,10
structure length 99,273,99,10
publication title Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide of HIV gp120 MN Isolate
rcsb
molecule tags Immune system
molecule keywords H-2 class I histocompatibility antigen, D-D alpha chain
source organism Mus musculus
pdb deposition date2016-06-07
LinkProt deposition date2017-10-14
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...

...loading similar chains in PDB, please wait...


 
#similar chains in the LinkProt database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unlinked
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling