5H3DABCD

Helical structure of membrane tubules decorated by acap1 (barph doamin) protein by cryo-electron microscopy and md simulation
Link type Probability Loop ranges Chain A piercings Chain B piercings Chain C piercings Chain D piercings
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Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
view details
Other Other 44% -A +31B -173B +193B +38C -173C +193C -365D -364A -362C +5D -17D +132D -175D -365D -255A +365A -134D +156D +362D
Interpreting sequences
Chain A Sequence
MTVKLDFEECLKDSPRFRASIELVEAEVSELETRLEKLLKLGTGLLESGRHYLAASRAFVVGICDLARLGPPEPMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAESLEAALTHNAEVPRRRAQEAEEAGAALRTARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEELSRLSQYRKELGAQLHQLVLNSAREKRDMEQRHVLLKQKELGGEEPEPSLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVYQKKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCLLQADSERLLQLWVSAVQSSIASAFS
Chain A Sequence
MTVKLDFEECLKDSPRFRASIELVEAEVSELETRLEKLLKLGTGLLESGRHYLAASRAFVVGICDLARLGPPEPMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAESLEAALTHNAEVPRRRAQEAEEAGAALRTARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEELSRLSQYRKELGAQLHQLVLNSAREKRDMEQRHVLLKQKELGGEEPEPSLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVYQKKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCLLQADSERLLQLWVSAVQSSIAS
Chain A Sequence
MTVKLDFEECLKDSPRFRASIELVEAEVSELETRLEKLLKLGTGLLESGRHYLAASRAFVVGICDLARLGPPEPMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAESLEAALTHNAEVPRRRAQEAEEAGAALRTARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEELSRLSQYRKELGAQLHQLVLNSAREKRDMEQRHVLLKQKELGGEEPEPSLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVYQKKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCLLQADSERLLQLWVSAVQSSIASAFS
Chain A Sequence
MTVKLDFEECLKDSPRFRASIELVEAEVSELETRLEKLLKLGTGLLESGRHYLAASRAFVVGICDLARLGPPEPMMAECLEKFTVSLNHKLDSHAELLDATQHTLQQQIQTLVKEGLRGFREARRDFWRGAESLEAALTHNAEVPRRRAQEAEEAGAALRTARAGYRGRALDYALQINVIEDKRKFDIMEFVLRLVEAQATHFQQGHEELSRLSQYRKELGAQLHQLVLNSAREKRDMEQRHVLLKQKELGGEEPEPSLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVYQKKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCLLQADSERLLQLWVSAVQSSIAS
sequence length 364,361,364,361
structure length 364,361,364,361
publication title Electrostatic Interactions Dominated ACAP1BAR-PH Proteins Asymmetrical Membrane Binding and Lattice Assembly
rcsb
molecule tags Signaling protein
molecule keywords Arf-GAP with coiled-coil, ANK repeat and PH domain-containin
source organism Homo sapiens
pdb deposition date2016-10-22
LinkProt deposition date2019-01-18
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling