5GN7ABD

Crystal structure of alternative oxidase from trypanosoma brucei brucei complexed with cumarin derivative-17
Link type Probability Loop ranges Chain A piercings Chain B piercings Chain D piercings
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
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Hopf.2 U Ring Hopf.2 U Ring 32% -A -102B +124B -158B +184B +265B -288B -295B -151D -201D +274D
Interpreting sequences
Chain A Sequence
VWGHTQLNRLSFLETVPVVPLRVSDESSEDRPTWSLPDIENVAITHKKPNGLVDTLAYRSVRTCRWLFDTFSLYRFGSITESKVISRCLFLETVAGVPGMVGGMLRHLSSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPGLPLRVSIIITQAIMYLFLLVAYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPTKNDVPEVARVYWNLSKNATFRDLINVIRADEAEHRVVNHTFADMHEKRLQNSVNPFVVLK
Chain A Sequence
VWGHTQLNRLSFLETVPVVPLRVSDESSEDRPTWSLPDIENVAITHKKPNGLVDTLAYRSVRTCRWLFDTFSLYRFGSITESKVISRCLFLETVAGVPGMVGGMLRHLSSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPGLPLRVSIIITQAIMYLFLLVAYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPTKNDVPEVARVYWNLSKNATFRDLINVIRADEAEHRVVNHTFADMHEKRLQNSVNPFVVLK
Chain A Sequence
VWGHTQLNRLSFLETVPVVPLRVSDESSEDRPTWSLPDIENVAITHKKPNGLVDTLAYRSVRTCRWLFDTFSLYRFGSITESKVISRCLFLETVAGVPGMVGGMLRHLSSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPGLPLRVSIIITQAIMYLFLLVAYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPTKNDVPEVARVYWNLSKNATFRDLINVIRADEAEHRVVNHTFADMHEKRLQNSVNPFVVLK
sequence length 264,264,264
structure length 264,264,264
publication title Discovery of trypanocidal coumarins with dual-inhibition for African trypanosomes glycerol kinase and alternative oxidase
rcsb
molecule tags Transferase
molecule keywords Alternative oxidase, mitochondrial
source organism Trypanosoma brucei brucei
pdb deposition date2016-07-19
LinkProt deposition date2017-08-29
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling