5GKDABCD

Structure of pl6 family alginate lyase alygc
Link type Probability Chain A piercings Chain B piercings Chain C piercings Chain D piercings
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
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Other Other 43% +728B +242C -415C +688C +711C -728C +200D +221D +243D -423D +727A +727A -4A +14A +728A -307B +414B +728B
Interpreting sequences
Chain A Sequence
ADLLVKTPEAYDQALKKAKPGDDIILANGTWRDFEVLFEAKGNENKPITLRGQTPGKVFLTGQSNLRLAGEHLIVSGLVFKDGYTPTGEVIAFRRNKDVLASHSRVTQVVIDNFSNPEKFEQDSWVMVYGRHNRFDHNHLVGKRNKGVTMAVRLTTESSQQNHHRIDHNYFGPRPILGSNGGETLRIGTSHHSLTDSFTLVENNYFDRCNGEVEIISNKSGKNSIRNNVFFESRGTLTLRHGNGNIVENNVFFGNGVDHTGGIRVINRDQIIRNNYLEGLTGYRFGSGLTVMNGVPNSKINRYHQVDNALIENNTLVNVEHIQFAAGSDKERSAAPINSNMNNNLIVNDQGTDGITAFDDISGIKFKDNLLNQDAKPSINKGFEQADITMQRHDNGLLYPEAKTQQKYGVSTQLEPIGKDEVGVSWYPKVEPDVAFGSGKHIAVSPGDNTLFDAIASAETGDVLVLQAGEYWVSKILSLDKTLTIRAQEKGSAVIFPQRSTLIEINNKGNLTLDGVYVDATNAPDAAGNTLIRTTRLPMQRNYRLAIKNSTFENLDINHSYHFFDAGNRSFADYIEVQDSQFKHITGDLFRLNKETDDLGIYNVEYLTIENSNVSDLQGAIAKVYRGGTDESTFGPHVVMNNNIFNEVGKGKRNKSAASLILHGTQVNKMTTNEFNNSAPIIFELTVGEPKTWVTGNVFEGTPEPVVRDLFPLSGATTTISGNTVL
Chain A Sequence
ADLLVKTPEAYDQALKKAKPGDDIILANGTWRDFEVLFEAKGNENKPITLRGQTPGKVFLTGQSNLRLAGEHLIVSGLVFKDGYTPTGEVIAFRRNKDVLASHSRVTQVVIDNFSNPEKFEQDSWVMVYGRHNRFDHNHLVGKRNKGVTMAVRLTTESSQQNHHRIDHNYFGPRPILGSNGGETLRIGTSHHSLTDSFTLVENNYFDRCNGEVEIISNKSGKNSIRNNVFFESRGTLTLRHGNGNIVENNVFFGNGVDHTGGIRVINRDQIIRNNYLEGLTGYRFGSGLTVMNGVPNSKINRYHQVDNALIENNTLVNVEHIQFAAGSDKERSAAPINSNMNNNLIVNDQGTDGITAFDDISGIKFKDNLLNQDAKPSINKGFEQADITMQRHDNGLLYPEAKTQQKYGVSTQLEPIGKDEVGVSWYPKVEPDVAFGSGKHIAVSPGDNTLFDAIASAETGDVLVLQAGEYWVSKILSLDKTLTIRAQEKGSAVIFPQRSTLIEINNKGNLTLDGVYVDATNAPDAAGNTLIRTTRLPMQRNYRLAIKNSTFENLDINHSYHFFDAGNRSFADYIEVQDSQFKHITGDLFRLNKETDDLGIYNVEYLTIENSNVSDLQGAIAKVYRGGTDESTFGPHVVMNNNIFNEVGKGKRNKSAASLILHGTQVNKMTTNEFNNSAPIIFELTVGEPKTWVTGNVFEGTPEPVVRDLFPLSGATTTISGNTVL
Chain A Sequence
ADLLVKTPEAYDQALKKAKPGDDIILANGTWRDFEVLFEAKGNENKPITLRGQTPGKVFLTGQSNLRLAGEHLIVSGLVFKDGYTPTGEVIAFRRNKDVLASHSRVTQVVIDNFSNPEKFEQDSWVMVYGRHNRFDHNHLVGKRNKGVTMAVRLTTESSQQNHHRIDHNYFGPRPILGSNGGETLRIGTSHHSLTDSFTLVENNYFDRCNGEVEIISNKSGKNSIRNNVFFESRGTLTLRHGNGNIVENNVFFGNGVDHTGGIRVINRDQIIRNNYLEGLTGYRFGSGLTVMNGVPNSKINRYHQVDNALIENNTLVNVEHIQFAAGSDKERSAAPINSNMNNNLIVNDQGTDGITAFDDISGIKFKDNLLNQDAKPSINKGFEQADITMQRHDNGLLYPEAKTQQKYGVSTQLEPIGKDEVGVSWYPKVEPDVAFGSGKHIAVSPGDNTLFDAIASAETGDVLVLQAGEYWVSKILSLDKTLTIRAQEKGSAVIFPQRSTLIEINNKGNLTLDGVYVDATNAPDAAGNTLIRTTRLPMQRNYRLAIKNSTFENLDINHSYHFFDAGNRSFADYIEVQDSQFKHITGDLFRLNKETDDLGIYNVEYLTIENSNVSDLQGAIAKVYRGGTDESTFGPHVVMNNNIFNEVGKGKRNKSAASLILHGTQVNKMTTNEFNNSAPIIFELTVGEPKTWVTGNVFEGTPEPVVRDLFPLSGATTTISGNTVL
Chain A Sequence
ADLLVKTPEAYDQALKKAKPGDDIILANGTWRDFEVLFEAKGNENKPITLRGQTPGKVFLTGQSNLRLAGEHLIVSGLVFKDGYTPTGEVIAFRRNKDVLASHSRVTQVVIDNFSNPEKFEQDSWVMVYGRHNRFDHNHLVGKRNKGVTMAVRLTTESSQQNHHRIDHNYFGPRPILGSNGGETLRIGTSHHSLTDSFTLVENNYFDRCNGEVEIISNKSGKNSIRNNVFFESRGTLTLRHGNGNIVENNVFFGNGVDHTGGIRVINRDQIIRNNYLEGLTGYRFGSGLTVMNGVPNSKINRYHQVDNALIENNTLVNVEHIQFAAGSDKERSAAPINSNMNNNLIVNDQGTDGITAFDDISGIKFKDNLLNQDAKPSINKGFEQADITMQRHDNGLLYPEAKTQQKYGVSTQLEPIGKDEVGVSWYPKVEPDVAFGSGKHIAVSPGDNTLFDAIASAETGDVLVLQAGEYWVSKILSLDKTLTIRAQEKGSAVIFPQRSTLIEINNKGNLTLDGVYVDATNAPDAAGNTLIRTTRLPMQRNYRLAIKNSTFENLDINHSYHFFDAGNRSFADYIEVQDSQFKHITGDLFRLNKETDDLGIYNVEYLTIENSNVSDLQGAIAKVYRGGTDESTFGPHVVMNNNIFNEVGKGKRNKSAASLILHGTQVNKMTTNEFNNSAPIIFELTVGEPKTWVTGNVFEGTPEPVVRDLFPLSGATTTISGNTVL
sequence length 726,726,726,726
structure length 726,726,726,726
publication title Novel Molecular Insights into the Catalytic Mechanism of Marine Bacterial Alginate Lyase AlyGC from Polysaccharide Lyase Family 6
doi rcsb
molecule tags Lyase
molecule keywords AlyGC
source organism Glaciecola chathamensis
pdb deposition date2016-07-04
LinkProt deposition date2017-02-23
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling