5GJQQfhp

Structure of the human 26s proteasome bound to usp14-ubal
Link type Probability Chain Q piercings Chain f piercings Chain h piercings Chain p piercings
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
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Other Other 38% +210f +422h -193h -423p -166p
Interpreting sequences
Chain Q Sequence
AAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT
Chain Q Sequence
RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD
Chain Q Sequence
SRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAER
Chain Q Sequence
TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLE
sequence length 421,213,244,220
structure length 421,213,244,220
publication title An atomic structure of the human 26S proteasome.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Proteasome subunit beta type-6
source organism Homo sapiens
ec nomenclature ec 3.4.25.1: Proteasome endopeptidase complex.
ec 3.4.25.1: Proteasome endopeptidase complex.
ec 3.4.25.1: Proteasome endopeptidase complex.
pdb deposition date2016-07-01
LinkProt deposition date2016-09-22

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
Qfhp PF01399 PCIPCI domain
Qfhp PF00227 ProteasomeProteasome subunit
Qfhp PF00227 ProteasomeProteasome subunit
Qfhp PF10584 Proteasome_A_NProteasome subunit A N-terminal signature
Qfhp PF00227 ProteasomeProteasome subunit
Qfhp PF12465 Pr_beta_CProteasome beta subunits C terminal
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling