5GJQQYpq

Structure of the human 26s proteasome bound to usp14-ubal
Y: 27-35
Link type Probability Chain Q piercings Chain Y piercings Chain p piercings Chain q piercings
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
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Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
view details
Other Other 38% -206p -423q
Interpreting sequences
Chain Q Sequence
AAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT
Chain Q Sequence
EKKQPVDLGLLEEDDEFEEFPAEDW-------DAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKME
Chain Q Sequence
TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLE
Chain Q Sequence
SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD
sequence length 421,66,220,204
structure length 421,59,220,204
publication title An atomic structure of the human 26S proteasome.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Proteasome subunit beta type-6
source organism Homo sapiens
missing residues Y: 27-35
ec nomenclature ec 3.4.25.1: Proteasome endopeptidase complex.
ec 3.4.25.1: Proteasome endopeptidase complex.
pdb deposition date2016-07-01
LinkProt deposition date2016-09-22

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
QYpq PF01399 PCIPCI domain
QYpq PF05160 DSS1_SEM1DSS1/SEM1 family
QYpq PF00227 ProteasomeProteasome subunit
QYpq PF12465 Pr_beta_CProteasome beta subunits C terminal
QYpq PF00227 ProteasomeProteasome subunit
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling