| Link type | Probability | Chain O piercings | Chain R piercings | Chain U piercings | Chain Y piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
| view details |
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Other | 31% | -389R -377U +191Y -230Y +296Y | +376O +68U +376Y | -265O +295O +230R -389R -69Y | |||||||||
Chain O Sequence |
DVPGFLQQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGD--IKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDILT |
Chain O Sequence |
NPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM |
Chain O Sequence |
LAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE---------SKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEE |
Chain O Sequence |
EKKQPVDLGLLEEDDEFEEFPAEDW-------DAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKME |
| sequence length | 374,376,292,66 |
| structure length | 372,376,283,59 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | O: 54-57 U: 142-152 Y: 27-35 |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| ORUY | PF01399 | PCI | PCI domain |
| ORUY | PF01399 | PCI | PCI domain |
| ORUY | PF10602 | RPN7 | 26S proteasome subunit RPN7 |
| ORUY | PF01398 | JAB | JAB1/Mov34/MPN/PAD-1 ubiquitin protease |
| ORUY | PF13012 | MitMem_reg | Maintenance of mitochondrial structure and function |
| ORUY | PF05160 | DSS1_SEM1 | DSS1/SEM1 family |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
