| Link type | Probability | Chain L piercings | Chain U piercings | Chain m piercings | Chain n piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
| view details |
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
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Other | 38% | -9U +57U -76U +89U -123U +135U -160U +200U -252U -389m | |||||||||||
Chain L Sequence |
KLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV |
Chain L Sequence |
LAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE---------SKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEE |
Chain L Sequence |
NQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQ |
Chain L Sequence |
IGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYAKESLKE |
| sequence length | 375,292,238,243 |
| structure length | 375,283,238,243 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | U: 142-152 |
| ec nomenclature |
ec 3.4.25.1: Proteasome endopeptidase complex. ec 3.4.25.1: Proteasome endopeptidase complex. |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| LUmn | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| LUmn | PF01398 | JAB | JAB1/Mov34/MPN/PAD-1 ubiquitin protease |
| LUmn | PF13012 | MitMem_reg | Maintenance of mitochondrial structure and function |
| LUmn | PF00227 | Proteasome | Proteasome subunit |
| LUmn | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
| LUmn | PF00227 | Proteasome | Proteasome subunit |
| LUmn | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
