| Link type | Probability | Chain L piercings | Chain T piercings | Chain U piercings | Chain Y piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
| view details |
|
Other | 38% | -329T -389U -9Y +57Y -76Y +89Y -123Y +135Y -160Y +200Y -252Y | -390L | -267L -350T | |||||||||
Chain L Sequence |
KLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV |
Chain L Sequence |
QAATGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLP----KLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV |
Chain L Sequence |
LAVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVE---------SKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEE |
Chain L Sequence |
EKKQPVDLGLLEEDDEFEEFPAEDW-------DAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKME |
| sequence length | 375,262,292,66 |
| structure length | 375,258,283,59 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | T: 130-135 U: 142-152 Y: 27-35 |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| LTUY | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| LTUY | PF10075 | CSN8_PSD8_EIF3K | CSN8/PSMD8/EIF3K family |
| LTUY | PF01398 | JAB | JAB1/Mov34/MPN/PAD-1 ubiquitin protease |
| LTUY | PF13012 | MitMem_reg | Maintenance of mitochondrial structure and function |
| LTUY | PF05160 | DSS1_SEM1 | DSS1/SEM1 family |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
