| Link type | Probability | Chain K piercings | Chain Y piercings | Chain i piercings | Chain p piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
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Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
| view details |
|
Other | 30% | +48p +220p | +418K +419K -221i -419p | -231K -62Y | |||||||||
Chain K Sequence |
DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK |
Chain K Sequence |
EKKQPVDLGLLEEDDEFEEFPAEDW-------DAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKME |
Chain K Sequence |
AERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYLAA |
Chain K Sequence |
TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLE |
| sequence length | 380,66,231,220 |
| structure length | 380,59,231,220 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | Y: 27-35 |
| ec nomenclature |
ec 3.4.25.1: Proteasome endopeptidase complex. ec 3.4.25.1: Proteasome endopeptidase complex. |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| KYip | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| KYip | PF05160 | DSS1_SEM1 | DSS1/SEM1 family |
| KYip | PF00227 | Proteasome | Proteasome subunit |
| KYip | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
| KYip | PF00227 | Proteasome | Proteasome subunit |
| KYip | PF12465 | Pr_beta_C | Proteasome beta subunits C terminal |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
