| Link type | Probability | Chain I piercings | Chain Q piercings | Chain k piercings | Chain l piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
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Other | 32% | -422Q -423Q -171k +254k -277k +294k -323k -430k -244l | -429I +23k +429l | ||||||||||
Chain I Sequence |
LERIKDYLLMEEEFIRNQEQ------KQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK |
Chain I Sequence |
AAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT |
Chain I Sequence |
SYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ |
Chain I Sequence |
YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI |
| sequence length | 365,421,243,234 |
| structure length | 359,421,243,234 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | I: 84-91 |
| ec nomenclature |
ec 3.4.25.1: Proteasome endopeptidase complex. ec 3.4.25.1: Proteasome endopeptidase complex. |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| IQkl | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| IQkl | PF01399 | PCI | PCI domain |
| IQkl | PF00227 | Proteasome | Proteasome subunit |
| IQkl | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
| IQkl | PF00227 | Proteasome | Proteasome subunit |
| IQkl | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
