| Link type | Probability | Chain H piercings | Chain K piercings | Chain Y piercings | Chain l piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
|
Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
| view details |
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Other | 46% | +419K +433Y | -242Y +413l -423l -434l | -242l | |||||||||
Chain H Sequence |
QVEDDIQQLLKKINELTGIKESDTGL-------LAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN |
Chain H Sequence |
DLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK |
Chain H Sequence |
EKKQPVDLGLLEEDDEFEEFPAEDW-------DAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKME |
Chain H Sequence |
YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI |
| sequence length | 387,380,66,234 |
| structure length | 380,380,59,234 |
| publication title |
An atomic structure of the human 26S proteasome.
pubmed doi rcsb |
| molecule tags | Hydrolase |
| molecule keywords | Proteasome subunit beta type-6 |
| source organism | Homo sapiens |
| missing residues | H: 72-80 Y: 27-35 |
| ec nomenclature |
ec 3.4.25.1: Proteasome endopeptidase complex. |
| pdb deposition date | 2016-07-01 |
| LinkProt deposition date | 2016-09-22 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| HKYl | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| HKYl | PF00004 | AAA | ATPase family associated with various cellular activities (AAA) |
| HKYl | PF05160 | DSS1_SEM1 | DSS1/SEM1 family |
| HKYl | PF00227 | Proteasome | Proteasome subunit |
| HKYl | PF10584 | Proteasome_A_N | Proteasome subunit A N-terminal signature |
Image from the rcsb pdb (www.rcsb.org)#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
