5FUCBCDE

Biophysical and cellular characterisation of a junctional epitope antibody that locks il-6 and gp80 together in a stable complex: implications for new therapeutic strategies
B: 131-136 C: 137-139 D: 133-141 E: 8-17
Link type Probability Chain B piercings Chain C piercings Chain D piercings Chain E piercings
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Other Other 31% +288E -298E +35B -105B -299B -198C +221C -232C +274C -286C
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Interpreting sequences
Chain B Sequence
SSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAK----ITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM
Chain B Sequence
PQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNS-AEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGAGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHAVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWT
Chain B Sequence
PPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRK-------DFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGAGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHAVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTPWTE
Chain B Sequence
QFVESG--------SLRLNCATSGYIYSTYCMGWFRQAPGKEREGVAHIYTNSGRTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYCAARPSIRCASFSATEYKDWGQGTQ
sequence length 164,200,205,118
structure length 160,199,198,110
publication title Discovery of a Junctional Epitope Antibody that Stabilizes Il-6 and Gp80 Protein:Protein Interaction and Modulates its Downstream Signaling
doi rcsb
molecule tags Immune system
molecule keywords INTERLEUKIN-6
source organism Homo sapiens
missing residues B: 131-136 C: 137-139 D: 133-141 E: 8-17
pdb deposition date2016-01-25
LinkProt deposition date2017-01-28
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling