3MQ6ABGH

Domain swapped sgrai with dna and calcium bound
A: 24-31 G: 302-306 H: 302-305
Link type Probability Chain A piercings Chain B piercings Chain G piercings Chain H piercings
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
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Other Other 47% -340H -23A +45A +340B -339H
Interpreting sequences
Chain A Sequence
PFTYSIEATRNLATTERCIQDIR------RSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNG
Chain A Sequence
PFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEGRSAVHRAIRELYVPPTAADLARRFFAFLNERMELVNG
Chain A Sequence
PFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEG---VHRAIRELYVPPTAADLARRFFAFLNERMELVNG
Chain A Sequence
PFTYSIEATRNLATTERCIQDIRNAPVRNRSTQFQLAQQNMLAYTFGEVIPGFASAGINGMDYRDVIGRPVENAVTEGTHFFRDDFRVDSNAKAKVAGDIFEIVSSAVMWNCAARWNSLMVGEGWRSQPRYSRPTLSPSPRRQVAVLNLPRSFDWVSLLVPESQEVIEEFRAGLRKDGLGLPTSTPDLAVVVLPEEFQNDEMWREEIAGLTRPNQILLSGAYQRLQGRVQPGEISLAVAFKRSLRSDRLYQPLYEANVMQLLLEGKLGAPKVEFEVHTLAPEGTNAFVTYEAASLYGLAEG--AVHRAIRELYVPPTAADLARRFFAFLNERMELVNG
sequence length 338,338,338,338
structure length 332,338,335,336
publication title Domain swapping in allosteric modulation of DNA specificity.
pubmed doi rcsb
molecule tags Hydrolase/dna
molecule keywords SgraIR restriction enzyme
source organism Streptomyces griseus
missing residues A: 24-31 G: 302-306 H: 302-305
ec nomenclature ec 3.1.21.4: Type II site-specific deoxyribonuclease.
ec 3.1.21.4: Type II site-specific deoxyribonuclease.
ec 3.1.21.4: Type II site-specific deoxyribonuclease.
ec 3.1.21.4: Type II site-specific deoxyribonuclease.
pdb deposition date2010-04-27
LinkProt deposition date2016-10-29

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
ABGH PF07832 Bse634ICfr10I/Bse634I restriction endonuclease
ABGH PF07832 Bse634ICfr10I/Bse634I restriction endonuclease
ABGH PF07832 Bse634ICfr10I/Bse634I restriction endonuclease
ABGH PF07832 Bse634ICfr10I/Bse634I restriction endonuclease
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling