3H6ZAL

Crystal structure of the four mbt repeats of drosophila melanogaster sfmbt in complex with peptide rhr (me)k vlr
A: 576-593
Link type Probability Chain A piercings Chain L piercings
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
view details
Unlink Unlink 60% -534A +978A
Interpreting sequences
Chain A Sequence
GAMGSYDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVE----------------TSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRISQVRLATVTKIVGDRLFLRYFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLSDTGAVAAGQHLFHDIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNHKLEGPPR
Chain A Sequence
HRXVLR
sequence length 447,6
structure length 431,6
publication title Molecular recognition of histone lysine methylation by the Polycomb group repressor dSfmbt
pubmed doi rcsb
molecule tags Transcription
molecule keywords Polycomb protein Sfmbt
source organism Drosophila melanogaster
missing residues A: 576-593
pdb deposition date2009-04-24
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AL PF02820 MBTmbt repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.30.160 Mainly Beta Roll SH3 type barrels. SH3 type barrels. 3h6zA03
2.30.30.160 Mainly Beta Roll SH3 type barrels. SH3 type barrels. 3h6zA04
2.30.30.160 Mainly Beta Roll SH3 type barrels. SH3 type barrels. 3h6zA02
2.30.30.160 Mainly Beta Roll SH3 type barrels. SH3 type barrels. 3h6zA01
3H6ZAL 3H6ZBM
chains in the LinkProt database with same CATH superfamily
1OV3AD 1OV3BCD 2HL3BC 1OV3ABC 3H6ZBM 2HL3ABC 1OV3BC 1OV3BD 1OV3ACD 2HL3AC 2HL3AB 1OV3AC 1OV3AB 3H6ZAL 2HKNAB 1OV3ABCD 1OV3ABD 1AOJAB
chains in the LinkProt database with same CATH topology
2HL3BC 3H6ZBM 2HL3AC 2HL3ABC 2HL3AB 3H6ZAL 2HKNAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 3H6Z AL;  3H6Z BM; 
#chains in the LinkProt database with same CATH topology
 1OV3 AD;  1OV3 BCD;  2HL3 BC;  1OV3 ABC;  3H6Z BM;  2HL3 ABC;  1OV3 BC;  1OV3 BD;  1OV3 ACD;  2HL3 AC;  2HL3 AB;  1OV3 AC;  1OV3 AB;  3H6Z AL;  2HKN AB;  1OV3 ABCD;  1OV3 ABD;  1AOJ AB; 
#chains in the LinkProt database with same CATH homology
 2HL3 BC;  3H6Z BM;  2HL3 AC;  2HL3 ABC;  2HL3 AB;  3H6Z AL;  2HKN AB; 
...loading similar chains, please wait...

...loading similar chains in PDB, please wait...


 
#similar chains in the LinkProt database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unlinked
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling