3CYYABD

The crystal structure of zo-1 pdz2 in complex with the cx43 peptide
Link type Probability Chain A piercings Chain B piercings Chain D piercings
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
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Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
view details
Hopf.2 U Ring Hopf.2 U Ring 35% -206D +228D -3A -263D
Interpreting sequences
Chain A Sequence
KPTKVTLVKSAKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR
Chain A Sequence
KPTKVTLVKSAKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD
Chain A Sequence
RPRPDDLEI
sequence length 80,81,9
structure length 80,81,9
publication title Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
pubmed doi rcsb
molecule tags Peptide binding protein
molecule keywords Tight junction protein ZO-1
source organism Homo sapiens
pdb deposition date2008-04-27
LinkProt deposition date2016-10-29

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
ABD PF00595 PDZPDZ domain (Also known as DHR or GLGF)
ABD PF00595 PDZPDZ domain (Also known as DHR or GLGF)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.42.10 Mainly Beta Roll Pdz3 Domain Pdz3 Domain 3cyyA01
2.30.42.10 Mainly Beta Roll Pdz3 Domain Pdz3 Domain 3cyyB01
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH superfamily
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH topology
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
#chains in the LinkProt database with same CATH topology
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
#chains in the LinkProt database with same CATH homology
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling