2OSGAB

Solution structure and binding property of the domain-swapped dimer of zo2pdz2
Link type Probability Chain A piercings Chain B piercings
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
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Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
view details
Hopf.2 Hopf.2 48% -106B +129B -161B +65A -76A -83A
Interpreting sequences
Chain A Sequence
MIGVLLMKSRANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDSLE
Chain A Sequence
MIGVLLMKSRANEEYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDSLE
sequence length 83,83
structure length 83,83
publication title Domain-swapped Dimerization of the Second PDZ Domain of ZO2 May Provide a Structural Basis for the Polymerization of Claudins
pubmed doi rcsb
molecule tags Cell adhesion
molecule keywords Tight junction protein ZO-2
source organism Homo sapiens
pdb deposition date2007-02-05
LinkProt deposition date2016-10-29

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AB PF00595 PDZPDZ domain (Also known as DHR or GLGF)
AB PF00595 PDZPDZ domain (Also known as DHR or GLGF)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.42.10 Mainly Beta Roll Pdz3 Domain Pdz3 Domain 2osgA01
2.30.42.10 Mainly Beta Roll Pdz3 Domain Pdz3 Domain 2osgB01
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH superfamily
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH topology
3CYYABC 3CYYABCD 3CYYACD 3CYYBC 3CYYAD 2OSGAB 3CYYABD 3CYYAB 3CYYBCD 3CYYAC 3CYYBD 2RCZAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
#chains in the LinkProt database with same CATH topology
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
#chains in the LinkProt database with same CATH homology
 3CYY ABC;  3CYY ABCD;  3CYY ACD;  3CYY BC;  3CYY AD;  2OSG AB;  3CYY ABD;  3CYY AB;  3CYY BCD;  3CYY AC;  3CYY BD;  2RCZ AB; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling