| Link type | Probability | Chain B piercings | Chain D piercings | Chain E piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
| view details |
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
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Hopf.2 U Ring | 26% | -741D -425E +445E -468E | +738B -758B | |||||||||
Chain B Sequence |
TSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDE |
Chain B Sequence |
SAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDS------QTATKRIRM |
Chain B Sequence |
VESAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDS-------TATKRIRMA |
| sequence length | 426,69,72 |
| structure length | 426,63,65 |
| publication title |
Structure and Nuclear Import Function of the C- Terminal Domain of Influenza Virus Polymerase Pb2 Subunit
pubmed doi rcsb |
| molecule tags | Protein transport |
| molecule keywords | IMPORTIN ALPHA-1 SUBUNIT |
| source organism | Homo sapiens |
| missing residues | D: 741-748 E: 741-749 |
| pdb deposition date | 2007-01-11 |
| LinkProt deposition date | 2016-10-29 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| BDE | PF00514 | Arm | Armadillo/beta-catenin-like repeat |
| BDE | PF01749 | IBB | Importin beta binding domain |
| BDE | PF16186 | Arm_3 | Atypical Arm repeat |
| BDE | PF00604 | Flu_PB2 | Influenza RNA-dependent RNA polymerase subunit PB2 |
| BDE | PF00604 | Flu_PB2 | Influenza RNA-dependent RNA polymerase subunit PB2 |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant |
#chains in the LinkProt database with same CATH superfamily 2JDQ AE; 2JDQ ABE; 2JDQ ABD; 2JDQ ABDE; 2JDQ BD; 2JDQ BE; 2JDQ BDE; 2JDQ AB; #chains in the LinkProt database with same CATH topology 2JDQ AE; 2JDQ ABE; 2JDQ ABD; 2JDQ ABDE; 2JDQ BD; 2JDQ BE; 2JDQ BDE; 2JDQ AB; #chains in the LinkProt database with same CATH homology 2JDQ AE; 2JDQ ABE; 2JDQ ABD; 2JDQ ABDE; 2JDQ BD; 2JDQ BE; 2JDQ BDE; 2JDQ AB;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
