2G45AD

Co-crystal structure of znf ubp domain from the deubiquitinating enzyme isopeptidase t (isot) in complex with ubiquitin
Link type Probability Chain A piercings Chain D piercings
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
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Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
view details
Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
view details
Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
view details
Unlink Unlink 41% -195D +267D +247A -257A +267A -289A
Interpreting sequences
Chain A Sequence
VRQVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKT
Chain A Sequence
VRQVSKHAFSLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGADVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKT
sequence length 117,117
structure length 117,117
publication title The Ubiquitin Binding Domain ZnF UBP Recognizes the C-Terminal Diglycine Motif of Unanchored Ubiquitin.
pubmed doi rcsb
molecule tags Hydrolase
molecule keywords Ubiquitin carboxyl-terminal hydrolase 5
source organism Homo sapiens
ec nomenclature ec 3.4.19.12: Ubiquitinyl hydrolase 1.
ec 3.4.19.12: Ubiquitinyl hydrolase 1.
pdb deposition date2006-02-21
LinkProt deposition date2016-10-30

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AD PF02148 zf-UBPZn-finger in ubiquitin-hydrolases and other protein
AD PF02148 zf-UBPZn-finger in ubiquitin-hydrolases and other protein
Image from the rcsb pdb (www.rcsb.org)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling