| Link type | Probability | Chain A piercings | Chain B piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Unlink | 83% | +123B | |||||||||
| view details |
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Unlink | 83% | +123B | |||||||||
| view details |
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Unlink | 83% | +123B | |||||||||
| view details |
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Unlink | 83% | +123B | |||||||||
| view details |
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Unlink | 83% | +123B | |||||||||
| view details |
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Unlink | 83% | +123B | |||||||||
Chain A Sequence |
DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCSSEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA |
Chain A Sequence |
DCPSDWSSYEGHCYKPFSEPKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAFQTFGHSIFWMGLSNVWNQCNWQWSNAAMLRYKAWAEESYCVYFKSTNNKWRSRACRMMAQFVCEFQA |
| sequence length | 129,123 |
| structure length | 129,123 |
| publication title |
Crystal structure of coagulation factor IX-binding protein from habu snake venom at 2.6 A: implication of central loop swapping based on deletion in the linker region.
pubmed doi rcsb |
| molecule tags | Collagen binding protein |
| molecule keywords | PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN A) |
| pdb deposition date | 1998-07-02 |
| LinkProt deposition date | 2016-10-21 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| AB | PF00059 | Lectin_C | Lectin C-type domain |
| AB | PF00059 | Lectin_C | Lectin C-type domain |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | Roll | Mannose-Binding Protein A; Chain A | Mannose-Binding Protein A, subunit A | ||
| Alpha Beta | Roll | Mannose-Binding Protein A; Chain A | Mannose-Binding Protein A, subunit A |
#chains in the LinkProt database with same CATH superfamily 1IXX ABDF; 1IXX BEF; 1AFB 13; 1IXX BCDE; 1IXX CE; 1IXX ABDE; 1IXX CDF; 1IXX BCD; 1IXX AE; 1AFD 123; 1AFA 23; 1IXX ACEF; 1IXX ABF; 1AFB 12; 1IXX BDEF; 1IXX CEF; 1IXX CD; 1IOD BG; 1IXX DF; 1IXX AC; 1IXX AEF; 1AFD 13; 1IXX EF; 1IXX AB; 1IXX CDEF; 1X2W AB; 1IXX BD; 1IXX ABCF; 1IXX ABCE; 1IXX ABE; 1IXX ABC; 1AFD 12; 1BJ3 AB; 1AFA 12; 1AFB 123; 1AFB 23; 1IXX ABEF; 1IOD ABG; 1JWI AB; 1IXX ACDE; 1IXX ACE; 1IXX CDE; 1IXX ACDF; 1IOD AB; 1IXX ABD; 1IXX BCDF; 1IXX BF; 1AFA 13; 1IXX ABCD; 1IXX BCEF; 1IOD AG; 1IXX DEF; 1IXX BDF; 1IXX ADEF; 1IXX ACD; 1AFD 23; 1AFA 123; #chains in the LinkProt database with same CATH topology 1IXX ABDF; 1IXX BEF; 1AFB 13; 1IXX BCDE; 1IXX CE; 1IXX ABDE; 1IXX CDF; 1IXX BCD; 1IXX AE; 1AFD 123; 1AFA 23; 1IXX ACEF; 1IXX ABF; 1AFB 12; 1IXX BDEF; 1IXX CEF; 1IXX CD; 1IOD BG; 1IXX DF; 1IXX AC; 1IXX AEF; 1AFD 13; 1IXX EF; 1IXX AB; 1IXX CDEF; 1X2W AB; 1IXX BD; 1IXX ABCF; 1IXX ABCE; 1IXX ABE; 1IXX ABC; 1AFD 12; 1BJ3 AB; 1AFA 12; 1AFB 123; 1AFB 23; 1IXX ABEF; 1IOD ABG; 1JWI AB; 1IXX ACDE; 1IXX ACE; 1IXX CDE; 1IXX ACDF; 1IOD AB; 1IXX ABD; 1IXX BCDF; 1IXX BF; 1AFA 13; 1IXX ABCD; 1IXX BCEF; 1IOD AG; 1IXX DEF; 1IXX BDF; 1IXX ADEF; 1IXX ACD; 1AFD 23; 1AFA 123; #chains in the LinkProt database with same CATH homology 1IXX ABDF; 1IXX BEF; 1AFB 13; 1IXX BCDE; 1IXX CE; 1IXX ABDE; 1IXX CDF; 1IXX BCD; 1IXX AE; 1AFD 123; 1AFA 23; 1IXX ACEF; 1IXX ABF; 1AFB 12; 1IXX BDEF; 1IXX CEF; 1IXX CD; 1IOD BG; 1IXX DF; 1IXX AC; 1IXX AEF; 1AFD 13; 1IXX EF; 1IXX AB; 1IXX CDEF; 1X2W AB; 1IXX BD; 1IXX ABCF; 1IXX ABCE; 1IXX ABE; 1IXX ABC; 1AFD 12; 1BJ3 AB; 1AFA 12; 1AFB 123; 1AFB 23; 1IXX ABEF; 1IOD ABG; 1JWI AB; 1IXX ACDE; 1IXX ACE; 1IXX CDE; 1IXX ACDF; 1IOD AB; 1IXX ABD; 1IXX BCDF; 1IXX BF; 1AFA 13; 1IXX ABCD; 1IXX BCEF; 1IOD AG; 1IXX DEF; 1IXX BDF; 1IXX ADEF; 1IXX ACD; 1AFD 23; 1AFA 123;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
