1AOJAB

The sh3 domain of eps8 exists as a novel intertwined dimer
Link type Probability Chain A piercings Chain B piercings
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Unlink Unlink 62% -8B +66B +54A -66A
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Unlink Unlink 62% -8B +66B +54A -66A
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Unlink Unlink 62% -8B +66B +54A -66A
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Unlink Unlink 62% -8B +66B +54A -66A
view details
Unlink Unlink 62% -8B +66B +54A -66A
view details
Unlink Unlink 62% -8B +66B +54A -66A
view details
Unlink Unlink 62% -8B +66B +54A -66A
view details
Unlink Unlink 62% -8B +66B +54A -66A
Interpreting sequences
Chain A Sequence
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTPE
Chain A Sequence
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTPE
sequence length 60,60
structure length 60,60
publication title The SH3 domain of Eps8 exists as a novel intertwined dimer.
pubmed doi rcsb
molecule tags Signal transduction
molecule keywords EPS8
source organism Mus musculus
pdb deposition date1997-07-07
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AB PF00018 SH3_1SH3 domain
AB PF00018 SH3_1SH3 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.30.40 Mainly Beta Roll SH3 type barrels. SH3 Domains 1aojA00
2.30.30.40 Mainly Beta Roll SH3 type barrels. SH3 Domains 1aojB00
1OV3AD 1OV3BCD 1OV3ABC 1OV3BC 1OV3BD 1OV3ACD 1OV3AC 1OV3AB 1OV3ABCD 1OV3ABD 1AOJAB
chains in the LinkProt database with same CATH superfamily
1OV3AD 1OV3BCD 2HL3BC 1OV3ABC 3H6ZBM 2HL3ABC 1OV3BC 1OV3BD 1OV3ACD 2HL3AC 2HL3AB 1OV3AC 1OV3AB 3H6ZAL 2HKNAB 1OV3ABCD 1OV3ABD 1AOJAB
chains in the LinkProt database with same CATH topology
1OV3AD 1OV3BCD 1OV3ABC 1OV3BC 1OV3BD 1OV3ACD 1OV3AC 1OV3AB 1OV3ABCD 1OV3ABD 1AOJAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 1OV3 AD;  1OV3 BCD;  1OV3 ABC;  1OV3 BC;  1OV3 BD;  1OV3 ACD;  1OV3 AC;  1OV3 AB;  1OV3 ABCD;  1OV3 ABD;  1AOJ AB; 
#chains in the LinkProt database with same CATH topology
 1OV3 AD;  1OV3 BCD;  2HL3 BC;  1OV3 ABC;  3H6Z BM;  2HL3 ABC;  1OV3 BC;  1OV3 BD;  1OV3 ACD;  2HL3 AC;  2HL3 AB;  1OV3 AC;  1OV3 AB;  3H6Z AL;  2HKN AB;  1OV3 ABCD;  1OV3 ABD;  1AOJ AB; 
#chains in the LinkProt database with same CATH homology
 1OV3 AD;  1OV3 BCD;  1OV3 ABC;  1OV3 BC;  1OV3 BD;  1OV3 ACD;  1OV3 AC;  1OV3 AB;  1OV3 ABCD;  1OV3 ABD;  1AOJ AB; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling