1A92AD

Oligomerization domain of hepatitis delta antigen
Link type Probability Chain A piercings Chain D piercings
view details
Unlink Unlink 80% -41A +62A
view details
Unlink Unlink 80% -41A +62A
view details
Unlink Unlink 80% -41A +62A
Interpreting sequences
Chain A Sequence
GREDILEQWVSGRKKLEELERDLRKLKKKIKKLEEDNPWLGNIKGIIGKY
Chain A Sequence
GREDILEQWVSGRKKLEELERDLRKLKKKIKKLEEDNPWLGNIKGIIGK
sequence length 50,49
structure length 50,49
publication title Structural basis of the oligomerization of hepatitis delta antigen.
pubmed doi rcsb
molecule tags Leucine zipper
molecule keywords DELTA ANTIGEN
source organism Hepatitis delta virus
pdb deposition date1998-04-15
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AD PF01517 HDV_agHepatitis delta virus delta antigen
AD PF01517 HDV_agHepatitis delta virus delta antigen
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.220.40 Few Secondary Struct Irregular Light-harvesting Protein Light-harvesting Protein 1a92A00
4.10.220.40 Few Secondary Struct Irregular Light-harvesting Protein Light-harvesting Protein 1a92D00
1A92BD 1A92CD 1A92AB 1A92ACD 1A92ABD 1A92AD 1A92BCD 1A92AC 1A92ABC
chains in the LinkProt database with same CATH superfamily
1A92BD 1A92CD 1A92AB 1A92ACD 1A92ABD 1A92AD 1A92BCD 1A92AC 1A92ABC
chains in the LinkProt database with same CATH topology
1A92BD 1A92CD 1A92AB 1A92ACD 1A92ABD 1A92AD 1A92BCD 1A92AC 1A92ABC
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 1A92 BD;  1A92 CD;  1A92 AB;  1A92 ACD;  1A92 ABD;  1A92 AD;  1A92 BCD;  1A92 AC;  1A92 ABC; 
#chains in the LinkProt database with same CATH topology
 1A92 BD;  1A92 CD;  1A92 AB;  1A92 ACD;  1A92 ABD;  1A92 AD;  1A92 BCD;  1A92 AC;  1A92 ABC; 
#chains in the LinkProt database with same CATH homology
 1A92 BD;  1A92 CD;  1A92 AB;  1A92 ACD;  1A92 ABD;  1A92 AD;  1A92 BCD;  1A92 AC;  1A92 ABC; 
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#similar chains in the LinkProt database (?% sequence similarity)
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#similar chains, but unlinked
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#similar chains in the pdb database (?% sequence similarity)
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling