| Link type | Probability | Chain A piercings | Chain B piercings | Chain C piercings | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
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Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
| view details |
|
Other | 28% | -330B -306C | +182A -195A -341A -322C | +178A -201A +341A +341A +181B -200B +273B +290B | ||||||||
Chain A Sequence |
MASIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD |
Chain A Sequence |
MASIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD |
Chain A Sequence |
MASIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD |
| sequence length | 341,341,341 |
| structure length | 341,341,341 |
| publication title |
Crystal structure and acyl chain selectivity of Escherichia coli LpxD, the N-acyltransferase of lipid A biosynthesis
pubmed doi rcsb |
| molecule tags | Transferase |
| molecule keywords | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
| source organism | Escherichia coli |
| ec nomenclature |
ec 2.3.1.19: Phosphate butyryltransferase. ec 2.3.1.191: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase. ec 2.3.1.19: Phosphate butyryltransferase. ec 2.3.1.191: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase. ec 2.3.1.19: Phosphate butyryltransferase. ec 2.3.1.191: UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase. |
| pdb deposition date | 2008-09-11 |
| LinkProt deposition date | 2016-08-17 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| ABC | PF00132 | Hexapep | Bacterial transferase hexapeptide (six repeats) |
| ABC | PF04613 | LpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD |
| ABC | PF14602 | Hexapep_2 | Hexapeptide repeat of succinyl-transferase |
| ABC | PF00132 | Hexapep | Bacterial transferase hexapeptide (six repeats) |
| ABC | PF04613 | LpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD |
| ABC | PF14602 | Hexapep_2 | Hexapeptide repeat of succinyl-transferase |
| ABC | PF00132 | Hexapep | Bacterial transferase hexapeptide (six repeats) |
| ABC | PF04613 | LpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD |
| ABC | PF14602 | Hexapep_2 | Hexapeptide repeat of succinyl-transferase |
Image from the rcsb pdb (www.rcsb.org)cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase; domain 1 | Hexapeptide repeat proteins | ||
| Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase; domain 1 | Hexapeptide repeat proteins | ||
| Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase; domain 1 | Hexapeptide repeat proteins |
#chains in the LinkProt database with same CATH superfamily 3GOS AB; 3GOS AC; 3GOS ABC; 3EH0 BC; 3EH0 AC; 3GOS BC; 3EH0 ABC; 3EH0 AB; #chains in the LinkProt database with same CATH topology 3GOS AB; 3GOS AC; 3GOS ABC; 3EH0 BC; 3EH0 AC; 3GOS BC; 3EH0 ABC; 3EH0 AB; #chains in the LinkProt database with same CATH homology 3GOS AB; 3GOS AC; 3GOS ABC; 3EH0 BC; 3EH0 AC; 3GOS BC; 3EH0 ABC; 3EH0 AB;
#similar chains in the LinkProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unlinked ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
