1AFWAB

The 1.8 angstrom crystal structure of the dimeric peroxisomal thiolase of saccharomyces cerevisiae
A: 262-266
Link type Probability Chain A piercings Chain B piercings
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
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Unlink Unlink 54% +28A -417A
Interpreting sequences
Chain A Sequence
KNSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFI---GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQIGVVSMCIGTGMGAAAIFIKE
Chain A Sequence
KNSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQIGVVSMCIGTGMGAAAIFIKE
sequence length 393,393
structure length 390,393
publication title The 1.8 A crystal structure of the dimeric peroxisomal 3-ketoacyl-CoA thiolase of Saccharomyces cerevisiae: implications for substrate binding and reaction mechanism.
pubmed doi rcsb
molecule tags Thiolase
molecule keywords 3-KETOACETYL-COA THIOLASE
missing residues A: 262-266
ec nomenclature ec 2.3.1.16: Acetyl-CoA C-acyltransferase.
ec 2.3.1.16: Acetyl-CoA C-acyltransferase.
pdb deposition date1997-03-15
LinkProt deposition date2016-08-17

pfam database annotations

chain Pfam Accession CodePfam Family IdentifierPfam Description
AB PF00108 Thiolase_NThiolase, N-terminal domain
AB PF02803 Thiolase_CThiolase, C-terminal domain
AB PF00108 Thiolase_NThiolase, N-terminal domain
AB PF02803 Thiolase_CThiolase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.47.10 Alpha Beta 3-Layer(aba) Sandwich Peroxisomal Thiolase; Chain A, domain 1 Peroxisomal Thiolase; Chain A, domain 1 1afwA02
3.40.47.10 Alpha Beta 3-Layer(aba) Sandwich Peroxisomal Thiolase; Chain A, domain 1 Peroxisomal Thiolase; Chain A, domain 1 1afwA01
3.40.47.10 Alpha Beta 3-Layer(aba) Sandwich Peroxisomal Thiolase; Chain A, domain 1 Peroxisomal Thiolase; Chain A, domain 1 1afwB02
3.40.47.10 Alpha Beta 3-Layer(aba) Sandwich Peroxisomal Thiolase; Chain A, domain 1 Peroxisomal Thiolase; Chain A, domain 1 1afwB01
1AFWAB
chains in the LinkProt database with same CATH superfamily
1AFWAB
chains in the LinkProt database with same CATH topology
1AFWAB
chains in the LinkProt database with same CATH homology


 
#chains in the LinkProt database with same CATH superfamily
 1AFW AB; 
#chains in the LinkProt database with same CATH topology
 1AFW AB; 
#chains in the LinkProt database with same CATH homology
 1AFW AB; 
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LinkProt | Interdisciplinary Laboratory of Biological Systems Modelling